Gene Oter_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2338 
Symbol 
ID6207278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3029540 
End bp3030955 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content63% 
IMG OID641691993 
Productprotease Do 
Protein accessionYP_001819220 
Protein GI182414154 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.206121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0104866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC GCTCTCTCGC CAGCTTGCTC TCGATCGCGA TCGCGTCAGC CGTGCCTTTC 
GTCGCGCACG GCAAGGAAGC CAAACCCGAT CGGAAGCCGC CTACGCTGGC GATCGATCCG
AGCCCCGTCA CCGCCGGCAA GTCAGCCCTG GTGACGAGCT ATGCGGATAT TCTCGAGCCG
GCGCAGAAAG CGGTGGTCTC GGTTTACTCG ATGAAGATCG TGCGCGAACG CATGGCGCTG
AATCCGTTCC TGCGGCAGTT TTTCGGTAAC GAGATTCCGG ATCAGGAACG CGAGCGCAAG
GAAGAGGGGC TCGGCTCGGG GGTGATCGTT TCGCCCGACG GCTACATTCT CACAAACAAC
CACGTCGTTG AAGGAGCGGA TGAGTTGAAG GTGCTGCTCG CCGACGATCG CGAGTTCATT
GCCAAAGTCA TCGGCGCGGA TCCGAAGACC GACATCGCGG TAATCAAGAT CGAAGGCGAA
CGACTGCCGG TCGTGACGCT GGCCGACAGT GACAACATCC GCGTTGGCGA CGTCGTGTTC
GCGGTCGGGA ATCCGCTCGC GGTCGGGCAG ACGGTCACGA TGGGCATCGT CTCGGCCAAG
GGCCGCAGCG TGGGGATCCT CGACGAGGTC GCCGGCTATG AATCGTTCAT CCAAACCGAC
GCGGCCATCA ATATGGGGAA CTCCGGGGGC GCCTTGGTGG ATGCCAAAGG CCGGCTGGTG
GGAATCAACA GCGCGATCCT GTCGCCCTCG CGCGGCAACA TCGGCATCGG GTTCGCCGTT
CCGGTGAATC TAGCCGCGAC GGTCATGCAC AGCCTCATCG AGACCGGAAC GGTTTCGCGC
GGCTATCTCG GCGTGCAATC GCAGACGCTC GCCGCCGACG AGGCGGAGGC GTTTGGATTG
CCGCGGGACA CGAAGGGTGT GACCATTACC GACGTCACGC CGGACAGCGC GGCGGACAAG
GGCGGGCTGA AGGTGGGTGA CGTCGTCCTC AGCGTGAACG ACAAACCCGT CGCGGCGTTG
CGCGACCTGC GCATCTACAT CGCCCAGACC GCTCCCGGCT CCAAGGTGAA GCTGAAGATT
TCTCGCGACG GCAAACCGCA GGTGCTCGAC ATCGTATTGG GCAAACTGGA CGAGAAACCC
AACGAGTTGC TGACCGGTGT GGAGGTGTCT GCGTTGACGC CGGAGGCTCG ACGCCGGCTG
CGAATTCCGC CGCGGTTCGA CGGGCTGTTG GTGACATCGG TCGATCCTGA ATCGCCGTAT
GCGGACCGAC TGGCGCCTGA CGTCCTGATT TTGCAGGTCG ACCGCGAGGA CGTGAGCGAC
ATTGAAGCTG CGCGGCGTGC GCTGACGCCT GGCCGGCACA TCCTGATTGT TTACTATCGC
GGCTCGGCGC GCGTGATCGG GCTGACAGTG GAATAG
 
Protein sequence
MKFRSLASLL SIAIASAVPF VAHGKEAKPD RKPPTLAIDP SPVTAGKSAL VTSYADILEP 
AQKAVVSVYS MKIVRERMAL NPFLRQFFGN EIPDQERERK EEGLGSGVIV SPDGYILTNN
HVVEGADELK VLLADDREFI AKVIGADPKT DIAVIKIEGE RLPVVTLADS DNIRVGDVVF
AVGNPLAVGQ TVTMGIVSAK GRSVGILDEV AGYESFIQTD AAINMGNSGG ALVDAKGRLV
GINSAILSPS RGNIGIGFAV PVNLAATVMH SLIETGTVSR GYLGVQSQTL AADEAEAFGL
PRDTKGVTIT DVTPDSAADK GGLKVGDVVL SVNDKPVAAL RDLRIYIAQT APGSKVKLKI
SRDGKPQVLD IVLGKLDEKP NELLTGVEVS ALTPEARRRL RIPPRFDGLL VTSVDPESPY
ADRLAPDVLI LQVDREDVSD IEAARRALTP GRHILIVYYR GSARVIGLTV E