| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2256 |
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| Symbol | |
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| ID | 6205922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2905047 |
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| End bp | 2908598 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641691912 |
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| Product | immunoglobulin I-set domain-containing protein |
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| Protein accession | YP_001819139 |
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| Protein GI | 182414073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02608] delta-60 repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0104124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC GGGCTTTCGC CATTCTTCCC AGATCACTCG TCAGCATCTG TGTGGTGTGC
CTGGTCGCGT CCAATATCAG AGCCGCAGTC GCGCCGGATA CGCTGGCGCT GGATCCTGCT
TTCGCACCTG TGCTCGAATC GACGGCCGGT CGCACCAAAT CGGTGATCTC CCAACCCGAC
GGGAAACTCA TCGTGGCCGG CTCATTCACT CGGATCAACG GAGTCTCGCG AAATAATCTC
GCTCGGCTGA TGAAAGACGG CGCGGTTGAT CCGACGTTCT CTCCCGGCAT TGGTCCGAAT
GGCGAAATTT CGATGACGGC TCTCCAGCCC GATGGACACG TGATCGTCGT TGGCGGCTTT
ACCGCGTTCG GAACAGCCGC TCGAAACGGA ATCGCGCGAA TAAACCTGGA CGGGAGTCTC
GACACTTCGT TTGTGCCAGC AAAACTGACC AACTCCCGCG ACGAAACGTT GATGGATGGA
GTCGTTGCTG TACAGAGCGA CGGGCGGATT CTGGTCGGCC GCAAACAGGT ATGGTCAGGA
TCCGGATCCA TGGTCCGACT TGCTCCAGAC GGCAGCCTCG ATGCCGCGTT CTCTCGAAAC
GCGGCCGACA CGCCGGTGCA TGCAATTCGT GTTCTTTCCT CCGGCAAGAT ACTCGTGGCC
GGAAGATTTG ATTCGTATAA CGGCACCCCC TGCAAAGGTA TCGTTCGACT GAATGCCGAT
GGCACCGTCG ACCCCGGCTT TGCCAACTCA CTTCCCGCGG GTTTTTATCC GGTTGCGATG
GACGTTTGTC CGGACGGAAC CGTCGTGCTC GGAGCGGAGC GTTCCTCCAC TAACCTGATC
CGCCTCGCCT TGGACGGCTC GGTGGACCAA CAGTTCGAGC CGTGGGGAGG CTCTGATCGT
TTCGTGACGT CGCTGGCCGT GCAGCCCGAT GGCCGGATCA TCGCGGCCGG TTCCTTCGGG
GTTGTCGACG GTGTCGAGCA GCGAGTCGTG CGGCTATCGA CCAAAGGAGC CCGTGATCCG
AGTTGGGAAG CACCCGACGC TCCTCAGGAG CCTCTAGCGA TCCTTCTGCT GAAGGACAAC
CGCGTTCTCG TCGGGGGCTC GTCCGGCATG GTCGACGGCG TTCCGCGGTC GGGCCTGCAG
CGCTTGCACG CCGACGGCAG CCACGATGCC ACGTTTAGTG CGCAAGTGAG GGCCGCCGGG
ATAGTCCATG CCATGGTCCC ACGGACCGAT GGGAAGATTG CGATCGGTGG CCAGTTCAAT
TTCGTCAATG GTGCGCCTTC TGAAGGGCTG GCATTGCTAA ACGCCGACGG CACAACCGCT
GATGGATTTA GCGCGTCCGT GAGCCTCGTA AATGTGCCTT TGTATTCGGC CGCTGTCAGA
GCTCTCGCTC TGCAACCTGA TGGCCGGCTG CTTGTAGGCG GCAATTTCAA TAGAGTTAAT
GGCGAGCCAC ACAGCTATAT CACACGTCTC CAGTCCGGTG GTTCGATCGA TCCGACGTTC
TCTACGGGTG TGGGTCCGAA CGGGCCTGTG AACGGGATCT CTGTCCAGCC GGACGGCCAG
ATCGTCTTGG GTGGAAATTT CTCCGAGTTT AGCGGCGTAT TTCGCTCTGC AATCGCGCGC
ATCAGCGGGA CGGGCGCCTT GGATCCGTCA TTTACGCCCG GAACGTCGGG CTCGGTGAAC
ACAATGCTGT TGGATTCGAG CAACAGGATA TTTGTGGGTT CGTTCAACGG ATTGAAATGT
ATTCTTCCCG ACGGGAGGTC AGGCGATACC GGCCTGGTGC AGCCGATTGA CTCCGGAAGC
TTTGTCAGCG CGATCGCCCA GGGATCGGAC CGAAAGATTT ATGTGGAGGG CCTCATCGAT
CTGAATATCT GGGCCGATGG CGTCATGGAT CTGAGCGGCG AGAAGCGCAA TTTGGGCCTC
GTCCGACTAA GCTCAGACGG GAAGGTGGAC GGCAGTTTCG CACGAATCCC TGCGTCGCGC
ATCGGCGGTA TCGGTGCGCT GTGTCTTCAG AGCGATGGCA GCATAATCGC AGGTCGCGCC
TACAATATTG GTGGGTGGAA TACGAGCACG ACCGGAATCG CACGGTTTTC CAGCGCTGGC
TCGCTTGACT CAAGTTTTCG AGTGCTGGAT CTGGAGGATC CTGGGTTCAC CAGCATGGCG
CTGCTCCAGG ATGGCAGGAT ACTCGCGTCC GGGAGCCGTT TTCACGACAA GATCACCGAC
CAGCGCGGAC TGGCGAGATT CGCTGCTCCC AGCCGCCCTT CGCTCACCTC GCCCACCACT
GCCGTATTCG TCGCCGGCGT GGAAACTTCC CTTCAACTGA CGGCGACCGG CTGCCCCGCA
CCGACGATCG AACTGGTATC GGGTACGCTA CCTTCCTGGG CGGCATGGCA CCCGGATTCC
GGCGTAATCT CCGGAACGGC GCTCGCTGGT GCGCCCGAGA CGCTGCTGGT GTTCCGGGCG
GTCAACGTAG CAGGGCAGTC CTCCCCACGG GATCTACGAC TCAACGTGCA GGCCCGACCC
AGGTTCACTC GACAGCCACA GGGGGCGGCG ATCCCAGTCG GCGGGAGCGT TACCCTGAGT
GCGCAGGGGG ACGGCACGCC AGTCCCCTCG TTCCAGTGGC GGAGAAACGG GGTCGACCTG
CCAGGCCAGG TCGCCGCCTC GCTTACGCTT GCCGATATGC AGCCCGCCCT GGCGGGCGTG
TACACGGTCG TACTGTCGAA TTCTGTCGCA TCCACCGAAA GTAATCCCGC GGTCGTGGGA
GTCGATACGG CTGCAAAAGT GGTCGGGGCA GCCACCGAGG TAGGCCACGA TATCCCGCAT
TCGAACGGCA ATGTTTACGA CCAGGTGCTG CTGGCAGGCG AGGCGGCAAC GATCACGGCT
GATCCTGGAC AGATAACGCG TTTGTCCTAT CTCGATCTGA CGGATGACAT CGTGCAGGTT
GAGTTCTCGG GCGCCGGCTC CCTGACGATT ACCCTCGAAA CTCCGACTGG GCCGGCCCGG
CCGGTGAAGT ACAACCAGGA TGTCGAATAT GTGAAGGGGC ACGCCTCCCT GGTTCTGGTC
GGGGCGGACG AAACGACCAA CGTCGGCGCG TTCAGCGTTG GGCGAATCAC CGCTTCGAAC
CCAACGCTGT TCCGAGACGA CGTCAGCTAC GATGGATATG TCGATCTCCG CTCAATTGCC
ATCGCCAGTT CGGACGGAAA GTTCGGCGGT GTACGTACGG CGAACGTCGT ATACTCAGCG
GAACAAGGCA CAGTCGGGAT ACAGGCGATG GGCACCAGCT TCACCGGCCC GGTGTATGTG
GCCGACCTGC AAGGTTCCGG GTCAGCCGAG GTCGTCCTGC TCATCGGTTC AGCGACTACA
ATCGCCGTCA CGGGCGGAGA CCTGTTTCAG AGCAACGCCC AGGTAATTAG GACCGATGGC
ATCGACGAAC TGCAGTTTTG GCCGGGCAGC AGTTCACACG GCGTCCTCGC ACCGGCGCAG
CGCAATCGAG CACAACTGCT CCAAGACGGC ATCGACATAA CCGATCTGAT CGTAGTCCCA
CCCAGCCAGT AG
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| Protein sequence | MNIRAFAILP RSLVSICVVC LVASNIRAAV APDTLALDPA FAPVLESTAG RTKSVISQPD
GKLIVAGSFT RINGVSRNNL ARLMKDGAVD PTFSPGIGPN GEISMTALQP DGHVIVVGGF
TAFGTAARNG IARINLDGSL DTSFVPAKLT NSRDETLMDG VVAVQSDGRI LVGRKQVWSG
SGSMVRLAPD GSLDAAFSRN AADTPVHAIR VLSSGKILVA GRFDSYNGTP CKGIVRLNAD
GTVDPGFANS LPAGFYPVAM DVCPDGTVVL GAERSSTNLI RLALDGSVDQ QFEPWGGSDR
FVTSLAVQPD GRIIAAGSFG VVDGVEQRVV RLSTKGARDP SWEAPDAPQE PLAILLLKDN
RVLVGGSSGM VDGVPRSGLQ RLHADGSHDA TFSAQVRAAG IVHAMVPRTD GKIAIGGQFN
FVNGAPSEGL ALLNADGTTA DGFSASVSLV NVPLYSAAVR ALALQPDGRL LVGGNFNRVN
GEPHSYITRL QSGGSIDPTF STGVGPNGPV NGISVQPDGQ IVLGGNFSEF SGVFRSAIAR
ISGTGALDPS FTPGTSGSVN TMLLDSSNRI FVGSFNGLKC ILPDGRSGDT GLVQPIDSGS
FVSAIAQGSD RKIYVEGLID LNIWADGVMD LSGEKRNLGL VRLSSDGKVD GSFARIPASR
IGGIGALCLQ SDGSIIAGRA YNIGGWNTST TGIARFSSAG SLDSSFRVLD LEDPGFTSMA
LLQDGRILAS GSRFHDKITD QRGLARFAAP SRPSLTSPTT AVFVAGVETS LQLTATGCPA
PTIELVSGTL PSWAAWHPDS GVISGTALAG APETLLVFRA VNVAGQSSPR DLRLNVQARP
RFTRQPQGAA IPVGGSVTLS AQGDGTPVPS FQWRRNGVDL PGQVAASLTL ADMQPALAGV
YTVVLSNSVA STESNPAVVG VDTAAKVVGA ATEVGHDIPH SNGNVYDQVL LAGEAATITA
DPGQITRLSY LDLTDDIVQV EFSGAGSLTI TLETPTGPAR PVKYNQDVEY VKGHASLVLV
GADETTNVGA FSVGRITASN PTLFRDDVSY DGYVDLRSIA IASSDGKFGG VRTANVVYSA
EQGTVGIQAM GTSFTGPVYV ADLQGSGSAE VVLLIGSATT IAVTGGDLFQ SNAQVIRTDG
IDELQFWPGS SSHGVLAPAQ RNRAQLLQDG IDITDLIVVP PSQ
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