| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2221 |
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| Symbol | |
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| ID | 6204745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2862227 |
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| End bp | 2863762 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691876 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001819104 |
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| Protein GI | 182414038 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0708866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG CCGTTCCCGC CCCCGCGGCC ACCCACCGCG GCGCCATCAC CGTCTGCGTG
ATGCTCGCCA CGATCATGCA GGCGCTCGAC ACCACGATCG CCAATGTAGC GCTGCCCTAC
ATGCAGAGCA GCCTCTCGGC CGCGCAGGAC CAGATCAATC TCGTGCTGAC GTCCTACATC
GTCGCCGCGG CGATCATGAT GCCGGCGACC GGCTGGTTGT CCGCCCGGCT CGGTCGGAAA
AACCTGTTCC TGCTCTCCGT CGCGGGCTTC ACGTTCGCCT CGGTCCTCTG CGGCCTGGCC
GGATCGCTCG GCCAGATGGT GCTCTTTCGA CTGCTGCAAG GCGTCTTCGG CGCGACGCTC
GTGCCGCTTT CCCAAGCGGT CCTGCTCGAC GAATACCCGC CGGCGCAGCA TGGCTCGGCG
ATGGCGCTGT GGGGCGTCGG CGTGATGGTG GGCCCGATCC TGGGTCCGAC ACTCGGCGGC
TGGCTGACGG AGACCTACGA CTGGCGTTGG GTCTTCTATA TCAACCTGCC AGTGGGCGTG
CTGACGTTTC TCGGGCTCTC GCGCTACCTG CATCGAACCA CCCCGCAGCG CGGACTCTAT
TTCGACGGCT TCGGCTTTCT CACGCTCGCG GTCGCGATCG GCGCGCTGCA GATGATGCTC
GATCGCGGCG AACAACTGCA GTGGTTCGAC TCACCGGAAA TCATGGCCGA GGCGGCACTG
TCCGGGCTCG GGCTTTACCT GTTCGTAGTG CACACGCTGA CCGCGCGCCG GCCGTTTCTC
GACCTACGGC TGTTCCGCGA CCGCAATTTC GCCACGGGCA TGATTTTCAT CTTCGTCGTT
GGCGTGATCT TGCTGGCGAC GCTGGCCCTG CTGACGCCGT TCCTGCAGAC GCTGTTGAAT
TATCCGGTCA TGACCGCCGG CATGTTGCTG GCGCCGCGCG GCGTCGGCAC GATGCTCGCG
ATGATCATCG TCGGCCGGCT GGTTTCGCGG GTGGATCCGC GCTGGCTCGT CGCGCTGGGG
CTGTTGCTGA CGGCCGCGGC GCTGTGGCAG ATGAGCCGGT TCTCGCTCGA TGTCACGGCC
ACGATGCTCG TGTGGTCCGG CGTGGTGCAG GGGCTTGGGC TCGGCTTCCT CTTCGTGCCG
CTTAGCACGA TGACCTTCGC CACCCTACCT GCCGATCTGC GGACTTCGGG CACCGCGCTC
TACAGCCTGT CGCGGAATCT CGGCTCGAGC ATCGGCATCT CGGTTGTCAT TTACCTGCTG
GGGCAGTTTC ACAGCCGCGC ACACGCCAAC CTCGCCGAAT TCGTGCAGCC GTTTCGGGAT
CCGATGCAGC ATCTGCCGGC GCTCCTGGAC CCGTCGACGG CCGCCGGCCA GTCGCTGCTG
GAACGGTTGG TTTCGCAGCA GGCCGCGCTG CTCGCGTATT TGAGCGATTT CCGGTTCATG
CTCTACGTCG CGCTCGCTGC GCTCCCCCTG GTGTTGCTCA TGCGGCGACC GAATCACCGC
GCCAGTGACG AGGAACTCGC CGCGGCGATG GAGTAG
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| Protein sequence | MTAAVPAPAA THRGAITVCV MLATIMQALD TTIANVALPY MQSSLSAAQD QINLVLTSYI
VAAAIMMPAT GWLSARLGRK NLFLLSVAGF TFASVLCGLA GSLGQMVLFR LLQGVFGATL
VPLSQAVLLD EYPPAQHGSA MALWGVGVMV GPILGPTLGG WLTETYDWRW VFYINLPVGV
LTFLGLSRYL HRTTPQRGLY FDGFGFLTLA VAIGALQMML DRGEQLQWFD SPEIMAEAAL
SGLGLYLFVV HTLTARRPFL DLRLFRDRNF ATGMIFIFVV GVILLATLAL LTPFLQTLLN
YPVMTAGMLL APRGVGTMLA MIIVGRLVSR VDPRWLVALG LLLTAAALWQ MSRFSLDVTA
TMLVWSGVVQ GLGLGFLFVP LSTMTFATLP ADLRTSGTAL YSLSRNLGSS IGISVVIYLL
GQFHSRAHAN LAEFVQPFRD PMQHLPALLD PSTAAGQSLL ERLVSQQAAL LAYLSDFRFM
LYVALAALPL VLLMRRPNHR ASDEELAAAM E
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