| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2194 |
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| Symbol | |
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| ID | 6208388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2820891 |
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| End bp | 2822360 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691849 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001819077 |
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| Protein GI | 182414011 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.456574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCG CTTCCTCCAC CGCTCCGACC GGGCTGAGCT TTGATGTCGA ATATCAGTCC
GTCGCCGACG CGGCCAATCC CGATCTGCGC GGCCGAGGCA AGCTGATCAT CGATCCCGCG
GGGCCGTTCT ACCGGTTCAC CGGCGATGCG CGGGCCTTTC TCGGCCGGCC CACCGCGGTG
GAGTTTCATC CGGAGGAGAT TCGCAACGTC AGCGTCGTCG GCCGGCGCGC AGGGTTCGAC
ACGCCGATCG GCGTCGCCGG AAAAAAGCGC CAGCCGTTCG TGTTCTACAC CGGCAACCCC
GCCGAGGCGG TCGCGATCGC CCGGTTGCTG CCGCCGGACC GCGACGAGGA ATTCGTCTCC
AGCCAGGATT TCGCCCACCA GCTCTACCGG CTGCCGGCCG CGCGCTCGCC CTGGACCTGC
ATCACCAACC TGATCGTCGC CGCCAATGTC GCCGCGTTCA TCGTCATGGG CCTGCTCGGC
GCCGGCTGGG TCGAGACCGC CGACATGACG CCCTACGTCC GCTGGGTGGC CAACAACGGC
GCGGCGACGA CCGATGGCGA GTGGTGGCGG ATCGTGACCT CGATGTTCGT GCACTACGGG
CTGCTGCACC TCGCGCTGAA CATGTGGGCG CTGTTCCAAA CCGGACATTT CGTCGAGCGG
CTGTTCGGCC GGCCGTTGTT TGCGCTCGGC TACCTCGGCA GCGGCATCGT CGCGAGCTTC
GCCTCGATCT ACTGGCACGG TGATCAGATC TGGAGCGCCG GCGCCTCCGG CGCGGTGTTT
GGCGTCTACG GATTGCTGCT CGGCTTCATG GTGCGCGAGC GGCAATCGAT TCCGCCGCCC
GTGCTGCGGC CCTTGTTCAA GAGCACCCTG ATGTTCGCCG GCTACAATCT CGTGTTCGGC
TTTGTGTACC CACGGATCGA TAACGCCGCG CATCTCGGCG GGCTGCTCGG CGGCGTAGTG
CTCGGCTGGC TGATGGCGCT GCCGATCGCG CCTGAGGCGC GGGCCCGGCA AACCTCGGCG
CGTCTGCTGT TGGGCACGGC GGTGCTGGCC GGCGCGTGCA CGACGGGGGT ACTGTTGGCC
CCGCGGTTCC CCTATCGCTT CCGGGAACGG CTGCAGTTGC AGACGGTGAG TTCCGCCCTC
AACGAGCGCG AACTCGTGAA ACTGCAGGAG CAGGAGCAGC AACTCGCCAA CGCGCAGTCG
GCGCACCGGG CCGATCGGTT GGCCGATTGG ATCGAGGCGG AGATGATCCC CTTCTACGAG
GCGATGCGGG CCGAGTTCGA AGCCGTTCAT CTGACGCCGG GGCTGCAGAC CGACCAAGCG
CGGCGATTGA TGGTTGGGCG GACCGATGCC AAGCTTCGCC ACTACCGCCA GCTCGTGGCC
GACCTCCGGG CGAAAAAGCC GGACGCGCTC CAGCGCTACC TCGCGGCCGA GGAGAGCGCG
CTGAAATCGG CCCCATCATC ACCGCCCTAA
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| Protein sequence | MEPASSTAPT GLSFDVEYQS VADAANPDLR GRGKLIIDPA GPFYRFTGDA RAFLGRPTAV
EFHPEEIRNV SVVGRRAGFD TPIGVAGKKR QPFVFYTGNP AEAVAIARLL PPDRDEEFVS
SQDFAHQLYR LPAARSPWTC ITNLIVAANV AAFIVMGLLG AGWVETADMT PYVRWVANNG
AATTDGEWWR IVTSMFVHYG LLHLALNMWA LFQTGHFVER LFGRPLFALG YLGSGIVASF
ASIYWHGDQI WSAGASGAVF GVYGLLLGFM VRERQSIPPP VLRPLFKSTL MFAGYNLVFG
FVYPRIDNAA HLGGLLGGVV LGWLMALPIA PEARARQTSA RLLLGTAVLA GACTTGVLLA
PRFPYRFRER LQLQTVSSAL NERELVKLQE QEQQLANAQS AHRADRLADW IEAEMIPFYE
AMRAEFEAVH LTPGLQTDQA RRLMVGRTDA KLRHYRQLVA DLRAKKPDAL QRYLAAEESA
LKSAPSSPP
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