Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2117 |
Symbol | |
ID | 6207610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2712437 |
End bp | 2713102 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641691769 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001819000 |
Protein GI | 182413934 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.316099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC ACAGATCCCT AACCTCCGCG CTTCGGCGCG TTTTTCCGCA GGGTCTCCTC ATCGCCGGTC TCGCCCTCGG CTCCGTTTCC GTGCTGCACG CCGGCACGGG TACGGACCAC GGCTACTTCT GGTCGCTGTA TCGGGAAGGT GGATCCGGCA ACATTTCATT CCCGCAGGCC GGCACCTATG CGGGGAATTT CGCCATCAGT TACAGCAACG TGAACGACAT CGTGGGCGGC AAAGGCTGGA ATCCTGGCTC CGCGCGCACG GTGAACTACA ATATCGGCGC CCTCAGCGGG AGCTACAACT TCGTCGGCGT CTATGGGTGG ACCACGAACC CGCTCATCGA ATACTACGTG GCGGAGTTGG GTTCCGTGAC CGGGGGCACC TACGTGAACA ACGTCAGCAG CGACGGTCAC AGCTACAGCT TCTACAAACA GCAACGCGTC AACGCCCCGT CCATCCAGGG TACGGCGACG TTTTGGCAGT ACAAGGATAC GTGGGGTGGG TCCTCGACCG GCTCGAATCG CTCGGTCAAC ATGGCTAACC ACATCAACAA TTGGCGCAGC CGCGGCGGCC AGGGATTCGG CAGCTACAAC TACATGATCC TCGCGCTGGA GGCGTGGGGC GGAAAGAGCG GCTACATCAA CGCCACGGTG TGGTGA
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Protein sequence | MKHHRSLTSA LRRVFPQGLL IAGLALGSVS VLHAGTGTDH GYFWSLYREG GSGNISFPQA GTYAGNFAIS YSNVNDIVGG KGWNPGSART VNYNIGALSG SYNFVGVYGW TTNPLIEYYV AELGSVTGGT YVNNVSSDGH SYSFYKQQRV NAPSIQGTAT FWQYKDTWGG SSTGSNRSVN MANHINNWRS RGGQGFGSYN YMILALEAWG GKSGYINATV W
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