Gene Oter_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2068 
Symbol 
ID6206151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2657152 
End bp2657973 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID641691719 
Productmembrane protein-like protein 
Protein accessionYP_001818951 
Protein GI182413885 
COG category[S] Function unknown 
COG ID[COG3336] Predicted membrane protein 
TIGRFAM ID[TIGR02737] cytochrome c oxidase assembly factor CtaG 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.334225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACT GGCGCCACTG GCACAATGAG CCGTACCTGA TCGGCGGGCT GATTCTCGTC 
GGCTGGCTCT GGGCGATCTG CGCTGGCCCG CTGCGCGCGC GCCTGGCGCC CGGTGAATCT
TTTCCGCGCG GCGCGGCGTG GCGGTTCTAT TCGGGACTGG TCATTTTTTA TCTAGCGGTC
GGTTCACCGT TGGACCAGAT CGGTGAGCGC TTCCTGTTTT CGGCGCACAT GCTGCAGCAC
CAACTGCTGG TCTATCCTGC TGCAATCCTC GTTCTGCTTG GTCTGCCGAC CTGGATGGTG
GACCCGCTGC TCGCGACACC AAGGCGGCAA AGCGTGTGGC GCCTGCTCGT GCATCCCATC
TCCTGCACTA TTCTCTACTC GCTCACTATT TCGGTGTGGC ACCTGCCCGC GCTCTACGAC
CTCGCGCTCC GCCACAAAAC GATCCACGTG CTGGAGCACC TGATGTTTTT CGGCGCCGCG
CTGCTCTACT GGTGGCCGAT GCTGAGTCCT TCCGCGGTTT TGCCGCCCCG ACGGCCCGGA
ACGCTGATTC TCTATTTCCT CGCGGTGGAG ATCCTGATGA CGCCGATCTT CGCCTACGTG
ACTTTCTCGC AGGATGTGCT CTACGCGACC TACGAGTACG CCCCGCGCAT TCTTCCCGGC
TTTTCGGCCG CCGATGACCA GCTTCTCGCC GGTTCCAGCA TGAAGCTCGT CGGGATGGCG
GTGGCGCTCG GCGCGATCGC CGTCTGCTTC TGGCGCTGGT ATGCCGCTGG CGAGCGCACG
AATGTCTCGC CGCCCGCTGC GCAGTCGCGG CTGGCGCACT GA
 
Protein sequence
MIDWRHWHNE PYLIGGLILV GWLWAICAGP LRARLAPGES FPRGAAWRFY SGLVIFYLAV 
GSPLDQIGER FLFSAHMLQH QLLVYPAAIL VLLGLPTWMV DPLLATPRRQ SVWRLLVHPI
SCTILYSLTI SVWHLPALYD LALRHKTIHV LEHLMFFGAA LLYWWPMLSP SAVLPPRRPG
TLILYFLAVE ILMTPIFAYV TFSQDVLYAT YEYAPRILPG FSAADDQLLA GSSMKLVGMA
VALGAIAVCF WRWYAAGERT NVSPPAAQSR LAH