Gene Oter_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2066 
Symbol 
ID6206467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2654044 
End bp2655840 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content66% 
IMG OID641691717 
ProductTrkA domain-containing protein 
Protein accessionYP_001818949 
Protein GI182413883 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGGC AGATCGCCCT CGTATTCGTG CTGCTCGCCG CCACGCTGGC GAGCTTCATG 
CGGGAAAAAT TCCCGCCGGA CCTGACGGCC CTCGCGCTGC TCGTCGTGCT GATCGCGACG
CGGCTGCTGC CGATGGAGAA AGCCTTCAGC GTGTTCGCCA ATCCGGCGCC GATCACCATC
GGCGCGATGT TCGTGCTGAG TGCGGCCCTG GTAAAATGCG GCGCGATCGA TCTCTTCTTC
ACGCTCATCG AGCGTTCGGC CGGCTGGTAT TACGGCGTGG TCGTCGGCCT GCTGGTGCTG
GTCGTCGGCG CGATCTCGGC CTTCGTGAAC AACACGCCGG TCGTCGTCGT CTTCCTGCCG
GTGGTGCTGG GCCTCGCCCG GCGCATGCAG CTGTCGCCCT CGAAACTCCT GATCCCGCTC
TCCTACGCGG CCATTCTCGG CGGCACGTGC ACGCTCATCG GCACCAGCAC CAACCTGATC
GTCAACAGCA TCGCGGTCGC CAAGGGCCTG CCCTCGATCC GGATGTTCGA GCTGGCCTGG
CTCGGTATAC CGACGCTGCT CACCGCCGCC GTGTACCTCG CTATTGTCGG CCGCCGACTC
TTGCCCGATC GCGAGATGCT GACCTCGATC CTCAGCAGCG AAGAGCGGCG CGAATACATC
ACTGAGGCCT TCGTGCAGCC GGGCTCCGCC GTGCCGGGCA AGACGATCGC CGAGGCGGGA
CTCACCCACC GCCGCGGCAT TCGCGTGTTG GAACTGGTGC GCGACGGCAT ACCGATCTCG
CTCGAAACGC CGCGGCTGCG GCTGGAGGCG GGCGACCGGC TGCTCCTCGC CTGCCGGCCC
AAAGGCATCG TTCACACGCG CGGGATTGCC GGCGTCGACC TCATTTCCGA ACTGAACGTC
GGCCTCGAGC AGATCGCCGC GCACGAAGGC TCGATCGTCG AGGGCGTACT CGCACCCGCG
TCGGAGTTGG TGGGCCGCAC CCTGCGCGAA CTCAAGTTCC GCCAGCGGTT CCGCATGGTC
GTCCTCGCGA TTCATCGCCA GGGGTTGAAC CTCCGCGAGC AACTCGACTC CACCCCGTTG
CGCGCGGGCG ATGTGCTGCT GATGATGGGC ACCGACCCCG CCATCCAAGC GCTGCGCGCG
GGGCAGGACA TCATCCTGTT CGACCAGGCA CCGCTGCCCG CCCGCGCCAT GAACAAACGG
CTGCCTCTCG CCATGGCGGT CGTGGGAGCG ATCATCGCCA CGGCGTCGCT CAACTGGGTG
CCCATCGAAC TCGGCGCGCT CGCCGGCGCC GTCCTGCTTT GCGCCACCGG TTGCATCAAA
CCCCGCGACG CCTACCACGC GATCGAGTGG AACATCCTGT TCCTCATTTT CGGCATGCTG
GCCATGGGCC ACGCGATGGA GCACACCGGC GCCGCCGCCT ACGTGGCCCA TAACATCGTC
AGCTTCGTCA ACTACGTCGT CCCGCTGGAT CACCGTGCGA TCGTGATGCT TGCCTGCATC
TATCTGGTCA CGGCGGTGTT CACCGAAATC CTTTCCAACA ACGCCGTCGC CGCGCTCATG
GCACCGATCG CGATCGGCGT GGCCGTCGCG CTGCACGTCA ATCCCCAACC CTTCGTGGTG
GCGGTGATGT TCGCCGCGTC GGCCGCGTTC TCCACCCCGA TCGGCTATCA GACCAACACC
TACGTCTACG GCGTGGGCGG CTACCGGTTC GGCGATTTCT TGCGGATCGG GATTCCGCTG
AACGTGCTGT GCTTCGTCAC CGCCGTCCTC GTGATTCCGC GGATCTGGCC GCTGTGA
 
Protein sequence
MTWQIALVFV LLAATLASFM REKFPPDLTA LALLVVLIAT RLLPMEKAFS VFANPAPITI 
GAMFVLSAAL VKCGAIDLFF TLIERSAGWY YGVVVGLLVL VVGAISAFVN NTPVVVVFLP
VVLGLARRMQ LSPSKLLIPL SYAAILGGTC TLIGTSTNLI VNSIAVAKGL PSIRMFELAW
LGIPTLLTAA VYLAIVGRRL LPDREMLTSI LSSEERREYI TEAFVQPGSA VPGKTIAEAG
LTHRRGIRVL ELVRDGIPIS LETPRLRLEA GDRLLLACRP KGIVHTRGIA GVDLISELNV
GLEQIAAHEG SIVEGVLAPA SELVGRTLRE LKFRQRFRMV VLAIHRQGLN LREQLDSTPL
RAGDVLLMMG TDPAIQALRA GQDIILFDQA PLPARAMNKR LPLAMAVVGA IIATASLNWV
PIELGALAGA VLLCATGCIK PRDAYHAIEW NILFLIFGML AMGHAMEHTG AAAYVAHNIV
SFVNYVVPLD HRAIVMLACI YLVTAVFTEI LSNNAVAALM APIAIGVAVA LHVNPQPFVV
AVMFAASAAF STPIGYQTNT YVYGVGGYRF GDFLRIGIPL NVLCFVTAVL VIPRIWPL