Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2066 |
Symbol | |
ID | 6206467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2654044 |
End bp | 2655840 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691717 |
Product | TrkA domain-containing protein |
Protein accession | YP_001818949 |
Protein GI | 182413883 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.233721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTGGC AGATCGCCCT CGTATTCGTG CTGCTCGCCG CCACGCTGGC GAGCTTCATG CGGGAAAAAT TCCCGCCGGA CCTGACGGCC CTCGCGCTGC TCGTCGTGCT GATCGCGACG CGGCTGCTGC CGATGGAGAA AGCCTTCAGC GTGTTCGCCA ATCCGGCGCC GATCACCATC GGCGCGATGT TCGTGCTGAG TGCGGCCCTG GTAAAATGCG GCGCGATCGA TCTCTTCTTC ACGCTCATCG AGCGTTCGGC CGGCTGGTAT TACGGCGTGG TCGTCGGCCT GCTGGTGCTG GTCGTCGGCG CGATCTCGGC CTTCGTGAAC AACACGCCGG TCGTCGTCGT CTTCCTGCCG GTGGTGCTGG GCCTCGCCCG GCGCATGCAG CTGTCGCCCT CGAAACTCCT GATCCCGCTC TCCTACGCGG CCATTCTCGG CGGCACGTGC ACGCTCATCG GCACCAGCAC CAACCTGATC GTCAACAGCA TCGCGGTCGC CAAGGGCCTG CCCTCGATCC GGATGTTCGA GCTGGCCTGG CTCGGTATAC CGACGCTGCT CACCGCCGCC GTGTACCTCG CTATTGTCGG CCGCCGACTC TTGCCCGATC GCGAGATGCT GACCTCGATC CTCAGCAGCG AAGAGCGGCG CGAATACATC ACTGAGGCCT TCGTGCAGCC GGGCTCCGCC GTGCCGGGCA AGACGATCGC CGAGGCGGGA CTCACCCACC GCCGCGGCAT TCGCGTGTTG GAACTGGTGC GCGACGGCAT ACCGATCTCG CTCGAAACGC CGCGGCTGCG GCTGGAGGCG GGCGACCGGC TGCTCCTCGC CTGCCGGCCC AAAGGCATCG TTCACACGCG CGGGATTGCC GGCGTCGACC TCATTTCCGA ACTGAACGTC GGCCTCGAGC AGATCGCCGC GCACGAAGGC TCGATCGTCG AGGGCGTACT CGCACCCGCG TCGGAGTTGG TGGGCCGCAC CCTGCGCGAA CTCAAGTTCC GCCAGCGGTT CCGCATGGTC GTCCTCGCGA TTCATCGCCA GGGGTTGAAC CTCCGCGAGC AACTCGACTC CACCCCGTTG CGCGCGGGCG ATGTGCTGCT GATGATGGGC ACCGACCCCG CCATCCAAGC GCTGCGCGCG GGGCAGGACA TCATCCTGTT CGACCAGGCA CCGCTGCCCG CCCGCGCCAT GAACAAACGG CTGCCTCTCG CCATGGCGGT CGTGGGAGCG ATCATCGCCA CGGCGTCGCT CAACTGGGTG CCCATCGAAC TCGGCGCGCT CGCCGGCGCC GTCCTGCTTT GCGCCACCGG TTGCATCAAA CCCCGCGACG CCTACCACGC GATCGAGTGG AACATCCTGT TCCTCATTTT CGGCATGCTG GCCATGGGCC ACGCGATGGA GCACACCGGC GCCGCCGCCT ACGTGGCCCA TAACATCGTC AGCTTCGTCA ACTACGTCGT CCCGCTGGAT CACCGTGCGA TCGTGATGCT TGCCTGCATC TATCTGGTCA CGGCGGTGTT CACCGAAATC CTTTCCAACA ACGCCGTCGC CGCGCTCATG GCACCGATCG CGATCGGCGT GGCCGTCGCG CTGCACGTCA ATCCCCAACC CTTCGTGGTG GCGGTGATGT TCGCCGCGTC GGCCGCGTTC TCCACCCCGA TCGGCTATCA GACCAACACC TACGTCTACG GCGTGGGCGG CTACCGGTTC GGCGATTTCT TGCGGATCGG GATTCCGCTG AACGTGCTGT GCTTCGTCAC CGCCGTCCTC GTGATTCCGC GGATCTGGCC GCTGTGA
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Protein sequence | MTWQIALVFV LLAATLASFM REKFPPDLTA LALLVVLIAT RLLPMEKAFS VFANPAPITI GAMFVLSAAL VKCGAIDLFF TLIERSAGWY YGVVVGLLVL VVGAISAFVN NTPVVVVFLP VVLGLARRMQ LSPSKLLIPL SYAAILGGTC TLIGTSTNLI VNSIAVAKGL PSIRMFELAW LGIPTLLTAA VYLAIVGRRL LPDREMLTSI LSSEERREYI TEAFVQPGSA VPGKTIAEAG LTHRRGIRVL ELVRDGIPIS LETPRLRLEA GDRLLLACRP KGIVHTRGIA GVDLISELNV GLEQIAAHEG SIVEGVLAPA SELVGRTLRE LKFRQRFRMV VLAIHRQGLN LREQLDSTPL RAGDVLLMMG TDPAIQALRA GQDIILFDQA PLPARAMNKR LPLAMAVVGA IIATASLNWV PIELGALAGA VLLCATGCIK PRDAYHAIEW NILFLIFGML AMGHAMEHTG AAAYVAHNIV SFVNYVVPLD HRAIVMLACI YLVTAVFTEI LSNNAVAALM APIAIGVAVA LHVNPQPFVV AVMFAASAAF STPIGYQTNT YVYGVGGYRF GDFLRIGIPL NVLCFVTAVL VIPRIWPL
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