| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2020 |
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| Symbol | |
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| ID | 6205794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2600075 |
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| End bp | 2601229 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691670 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001818903 |
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| Protein GI | 182413837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.168799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCT CCTTTTTGCG CCCGTTGTTC TGCAGCCTCG CCGCGGCCGC TCTCATCGCC
ACCGCGCGAG CCGAAGCCGA GCCGATCAAA ATCGGCGAAT ACGCCTCGCT GACCGGCAAG
GAGGCCAGCC TCGGCCAGTC CTCGCACCAA GGCACCGTCC TCGCGGTCGA AACCATCAAC
GCCGCCGGCG GCGTGCTCGG CCGTCCGCTC CAGCTCATCA CCGAGGATAC GCAGTCGAAG
GCCGGCGAGA GCGGCACCGC CGTCCGCAAG CTCATTTCGC GCGACAAGGT CGTCGCGATC
CTCGGCGAGG TGGCCTCGAG CCGTTCGCTC GAAGGCGCGC CGATCTGCCA GCGGCTCAAG
GTCCCGATGG TCACGCCGGC TTCGACCAAC CCCAAGGTCA CCGAAACCGG CGATTACATT
TTCCGCGTCT GCTTCATCGA TCCGTTTCAA GGACCCGTGA TGGCGAAGTT CGCGCTCGAG
ACGCTCAAGG CCAAACGGCT CGGACTGATG GTCAGCGCCT CCTCCGCCTA CAGCGTCGGT
CTCGCCAAAT ACTTCAAGGA AGCCATCGTC GCCGGCGGCG GGACGATTGT GGCGGAGCAG
CGCTATCAGG AGGGCGACAA GGATTTCAAG GCGCAGCTCA CGGCGATCCG CGCCGCGGGC
GTCGACGCGA TTTTCAATCC CGGCTACTAC AACGAAGGCG CGTTGATGGT GAAACAGGCG
CGCGATCTCG GGATCACCGT GCCGATGTTC GGCGCCGACA GCTGGGAAGC CGAGGCGCTG
ATCGAGCTCG GCGGCAAGGC CGTGGAGGGC GTCTTCCTCT GCTCGCACTA TACGCCGACC
GATCCGGCGC CGCGCGTGCA GGACTTTGTC CGCGCTTACC GCCAGCGCTG GGGCGCCGGC
TACGCCCCGG ACTCCAACGC GTCGCTCGGC TACGATTCGG TGCTCGTGTT GGCCGACGCC
ATCCGCCGCG CCGGCTCCGC CGAGCCCAAG GCGATCCGCG ACGCGCTGGC CCAGACTCGG
AACTTCGAAG CGGTCACGGG CACGATCACG ATCGACAAGA ACCGCGACGC TTCGAAGAGC
GCCGTCGTCA TCACGGTCAA GCACGGCCAG TTCCAGTATG TCCAGACCAT GGAGCGGGCG
CCGCTCGCGC CGTGA
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| Protein sequence | MPPSFLRPLF CSLAAAALIA TARAEAEPIK IGEYASLTGK EASLGQSSHQ GTVLAVETIN
AAGGVLGRPL QLITEDTQSK AGESGTAVRK LISRDKVVAI LGEVASSRSL EGAPICQRLK
VPMVTPASTN PKVTETGDYI FRVCFIDPFQ GPVMAKFALE TLKAKRLGLM VSASSAYSVG
LAKYFKEAIV AGGGTIVAEQ RYQEGDKDFK AQLTAIRAAG VDAIFNPGYY NEGALMVKQA
RDLGITVPMF GADSWEAEAL IELGGKAVEG VFLCSHYTPT DPAPRVQDFV RAYRQRWGAG
YAPDSNASLG YDSVLVLADA IRRAGSAEPK AIRDALAQTR NFEAVTGTIT IDKNRDASKS
AVVITVKHGQ FQYVQTMERA PLAP
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