| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2019 |
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| Symbol | |
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| ID | 6208876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2598899 |
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| End bp | 2600023 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641691669 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001818902 |
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| Protein GI | 182413836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.288201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCC CCCGCCTTCT TTTGGTTTCA GCGTTCACGT TCTGCTCGCT CAGTGCTTGG
GCCGCCGAGC CGATCAAGGT CGGCGAATAC GCTTCGCTCA CCGGCAAGGA GGCCAGTTTC
GGCCAGTCCT CGCACAAGGG CATCGTGCTC GCGATCGAGG AGATCAACGC CGCCGGCGGC
GTGCTCGACC GCCCGCTCGA GCTGATCAGC GAGGACAACC AGACCCGGCC TGGCGAGTCC
GCCACGGTGG TGAAAAAGCT GATCGCCCGC GACAAGGTCA TCGCGCTGCT CGGTGAAGTC
GCCTCGGGTC GCGCCCTCGA AGCGGCGCCG CTCGCGCAGG CGTACCGCAT TCCGATGATC
GCACCTGCGG CCACGAATCC GAAAGTCACG CAAACGGGCA GCTACGTCTT CCGCGTGTGT
TTCATCGATC CGTTCCAAGG CACCGTGATG GCCAAGTTCG CGCATGAGGA CCTGAAAGCG
CGGAAAGTCG CGATCCTCTC CAGCGTCTCC AACGCCTACA GCGTCGGCTT GGCGAAATTT
TTCCGCGACA CGTTCACCGC CGCCGGCGGC GAGGTCGCGA TCGAGCAGAA GTATCAGGAA
GGCGACAAGG ACTTCCGCGC GCAGCTCACG GCGATCAAGG CCGCCAACGT CGATGTCGTT
TTCGTCCCGG GCTACTACAC CGAAGCGGCG CTGATCGTCC GGCAGGCGCG GGAGCTCGGG
CTGCAGATTC CATTCATCGG CGGTGACGGC TGGGTCGCCG ACCAACTCCT CGAGATCGGC
GGCGACGCGC TGAACGGCTG CTATTACTCG ACCCATTTCT CGCCGGAGAA CCAGGATCCC
AAGGTGCAGG CGTTCGTGCA GCGGTTCAGG CAGCGCTGGG GCGCGGAGAA CCCGGACGCC
TTCGCAGCGC TGGGCTACGA CGCCGCCTAC GTACTGGTCG ATGCGCTCCG GCGCGCCGGC
AGCACGGCTG GACCCAAGCT GCGGGACGCA CTCGCGGCGA CGAAGAATTT CGCCGGGATC
ACCGGCGTGA CGACGATCGA CCAGAACCGC GACGCCTCGA AGCCGGCCGC GATCATCGCC
ATCCGCGACG GCAAGCTCAC GTTCCATAAG ACCGTCGCGC CGTAG
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| Protein sequence | MKLPRLLLVS AFTFCSLSAW AAEPIKVGEY ASLTGKEASF GQSSHKGIVL AIEEINAAGG
VLDRPLELIS EDNQTRPGES ATVVKKLIAR DKVIALLGEV ASGRALEAAP LAQAYRIPMI
APAATNPKVT QTGSYVFRVC FIDPFQGTVM AKFAHEDLKA RKVAILSSVS NAYSVGLAKF
FRDTFTAAGG EVAIEQKYQE GDKDFRAQLT AIKAANVDVV FVPGYYTEAA LIVRQARELG
LQIPFIGGDG WVADQLLEIG GDALNGCYYS THFSPENQDP KVQAFVQRFR QRWGAENPDA
FAALGYDAAY VLVDALRRAG STAGPKLRDA LAATKNFAGI TGVTTIDQNR DASKPAAIIA
IRDGKLTFHK TVAP
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