| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1995 |
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| Symbol | |
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| ID | 6207539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2556659 |
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| End bp | 2559124 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691645 |
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| Product | permease |
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| Protein accession | YP_001818878 |
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| Protein GI | 182413812 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.70072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.177853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTG CGATCGCGGA CCCGACACAC TCCATTCCCC GCCTCATCAT GCTCGATCTT
CGCTACGCTT TTCGCGCGCT GCTCAAATCC CCCGGCTTCA CCTTCGTTGC CGTGCTGACG
ATCGCGGTCG GCATCGGCGC GAACACCGCG CTGTTCAGCA TCTTCAACCA GCTCGTGCTG
AATCCCGTCA CGCTGCCGCA GCCGTCCTCG CTCGTCGCGA TCTGGTCGGT CAACAACAGT
CTCAACTTCA ATGCGCCGGC CGTCGCCTGG CCGCGCTATC GCGAGATCGC GGCGAACGTC
CGCTCGTTCG CGCAGGTCGG CAACAGCGCG TTCAGCAACT TCACGCTCAC CGGCAACGGC
GATCCCGAGC AGCTCAACGG ACTCCGCGTC ACGGCCAGTT TCTTCCCCAC GCTCGGCGTG
CAGCCGCTGC TCGGCCGCAA CTTCACCCCC GAGGAGGACG CGCCCAACGG TCCCGCCGTC
TGCCTGCTCA GCCACGAGTT CTGGCAAACG CGCTTCGGCG GACGCGAGAG CGTCGTGGGC
GAAACCATTC AGCTCGACGG CCGCTCGTGG CAGGTGATCG GGGTGATGCC GCCGCGGCTC
AGCAATCCCT TCAGCGCGAC GCAGCTCTTC GCACCGCGCG TCTTCGAAAA CCCCGGACTC
ACGCCCGATC AGGTCGAGCG CGGCGCGAGT TTCATGCAGC CGATTGCGCG GCTGAAGCCC
GGCGTGTCGC TCGAGCAGGC GAACGCCGAG CTCACCGCGT TGAGCAAGAG TTACGCGGAG
CGCTACAGCA CCTACCTCGA CGCGCAGAAT CTTTCGGAAG CGCGCTTCTA CACCGACACC
CTCGTCGGCA ATCTCCGGCC GACGTTCTAC ACGCTGCTCG GCGCGGTCGG CTTCGTGCTG
CTGATCGCCT GCGCCAACGT CGCGAGCCTT TTCCTCGGCC GGCTCTCGGC CCGCCACAAG
GAGATCGCGG TGCGGCAATC GCTCGGCGCC ACGCGCCGCA CCATCGTGCG CCAGTTCGTG
TTGGAGAGCA TCGTGTTTTC GTTTTTCGCC GGCGCCCTCG GAATCCTCTT CTCGCTGTGG
GCGCTGTCCG CCGTCCAGTC GACCATCGCC TCCCAGCTGC CGCCCAACAC CACGCTCACG
CTCGATTGGC CCGCCGTGGC GTTCACCTTC GGCATCACGC TGGTGAGCGC GCTGCTCGTC
GGGCTCGCAC CGGCGTTGCA GGCGTCGCGT CAGGACCTCG CGGAAACGCT CAAGGACACC
GCGCGCGGCG CGCCCGGCGG AACGCGCGGC GGTCGGTTCC GCGCGTCGCT CGTGGTCGTG
GAGGTCGCGC TTTCGGTGAC GCTGCTCGTC GGTTCCACGC TGCTGCTGAT GAGCTTCCTG
CGTCTGCAGC GGACGCCGCC CGGTTTCGAC GCGCACGGCG TCGCCACGGC GTTCGTCGGC
ATCCCGGCCG GCCGCTACAA GACGAACGCC GAGCAGGCAC AATTCTTCCA GCAGGTGATC
GAGCGGCTGC AAACAGTGCC GCAGGTCAAA GCGGCCGCGG CGGCGATCGG CGTGCCGCTG
GGCGGCGTCA ACCCGGTCTC GCCCTACAGC GTCGGCGGCC GTCCGATTCT GCCACTGTCG
CAGCGTCCGC TCGCCGGATT GTGCATCGTC AGCGACGACT ACTTCCAAGT GCTGCAGATC
CCGCTGCGCG AGGGCCGCAG GTTCAACCCG CAGGATCGCG AAGGCGCGCC CGGCGTCGGC
ATCATCAACG AGTCGTTCGC CCGGCGGCTC TTCCCCGGCG AAAACCCGCT CGGCAAGGTG
CTCCTGCGCG GTCGGGACGC CAATGTGCAA ATCGAGATCG TCGGCATCGT GGGTGACGTG
AAAGCGAACG GATTGAACGC GCCCGCGCCC GACCAAATCT TCCTGCCGAT GCGGCAACTC
GGCCGGCCCG GCATGTCGGT GATGGCGCGC GTCGAGGGCG ACGCGGACGC GCTGCAGCCG
ATCCTGCGCA CGGCGGTCGC TTCAGTCGAT AAGGACCAGC CGATCTCGTT TTTCCAGACG
ATGTCGACCG CCGTGCAGCA AAGTCTCGGC GTGCAGCGGA TCGTCGCCTC GCTCACCTCA
CTCTTCGCCG CGATCGCGCT CGTGCTGTCC GCGATCGGGC TCTACTCCGT GCTCGCCTAC
ACCGTCGCCC AGCGCACGGG CGAAATCGGC ATCCGGATGG CGCTCGGCGC GCGGCCCGGC
CAGGTGGTGC GGCTGATCCT GCAGGGCGGA CTGAAACTCG TCGGACTCGG ACTGGCCGTC
GGACTCGCAG CGGCCGCAGC GACCGCGCGG CTGATCCAGT CGCTCCTGTT CGCCGTTGAA
CCGTTTGATC CGCTCATCTA TCTCGGCGTG GCCGGATTGT TCGCCGTCAT CTCGATGATC
GCGTGCATCC TGCCTTCGAT TCGGGCCGCG CGGATCGATC CGTTGATCGC CCTCCGAACG
GACTAA
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| Protein sequence | MPPAIADPTH SIPRLIMLDL RYAFRALLKS PGFTFVAVLT IAVGIGANTA LFSIFNQLVL
NPVTLPQPSS LVAIWSVNNS LNFNAPAVAW PRYREIAANV RSFAQVGNSA FSNFTLTGNG
DPEQLNGLRV TASFFPTLGV QPLLGRNFTP EEDAPNGPAV CLLSHEFWQT RFGGRESVVG
ETIQLDGRSW QVIGVMPPRL SNPFSATQLF APRVFENPGL TPDQVERGAS FMQPIARLKP
GVSLEQANAE LTALSKSYAE RYSTYLDAQN LSEARFYTDT LVGNLRPTFY TLLGAVGFVL
LIACANVASL FLGRLSARHK EIAVRQSLGA TRRTIVRQFV LESIVFSFFA GALGILFSLW
ALSAVQSTIA SQLPPNTTLT LDWPAVAFTF GITLVSALLV GLAPALQASR QDLAETLKDT
ARGAPGGTRG GRFRASLVVV EVALSVTLLV GSTLLLMSFL RLQRTPPGFD AHGVATAFVG
IPAGRYKTNA EQAQFFQQVI ERLQTVPQVK AAAAAIGVPL GGVNPVSPYS VGGRPILPLS
QRPLAGLCIV SDDYFQVLQI PLREGRRFNP QDREGAPGVG IINESFARRL FPGENPLGKV
LLRGRDANVQ IEIVGIVGDV KANGLNAPAP DQIFLPMRQL GRPGMSVMAR VEGDADALQP
ILRTAVASVD KDQPISFFQT MSTAVQQSLG VQRIVASLTS LFAAIALVLS AIGLYSVLAY
TVAQRTGEIG IRMALGARPG QVVRLILQGG LKLVGLGLAV GLAAAAATAR LIQSLLFAVE
PFDPLIYLGV AGLFAVISMI ACILPSIRAA RIDPLIALRT D
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