Gene Oter_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1930 
Symbol 
ID6206446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2426790 
End bp2427440 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID641691578 
Productendonuclease III 
Protein accessionYP_001818813 
Protein GI182413747 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.491388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC AGGAACGCGC CGCCTACGTC GATCGCCGGC TCGCCGAGCT GTATCCGGAT 
CCGAAGATCC CGCTCGACCA CCAGGACGCG TTCACGCTGC TGATCGCGGT GCTGCTGTCG
GCGCACACGA CGGATCGCTC GGTAAACAAG GCGACACCCG AGCTGTTTGC GCTCGCCGAC
ACGCCCGAGA AAATGGCGCG GGTGCCGGTG AAGGAGATCG AGCGCATCAT CCGGCCGGTC
GGACTTTTCG CGGCGAAGTC GAAGGCGATC GCCGGACTCG CACGGATGCT GATGGAAAAG
CACGGCGGGC AGGTGCCGCG GACGTTCGAA GAATTGGAGG AGCTGCCGGG AGTGGGGCAC
AAGACGGCGA GCGTGGTGAT GACGCAGGCG TTCGGCGTGC CGGCGTTTCC GGTCGACACG
CATATCCACC GGCTGGCGCA GCGTTGGAAG CTGACGAGTG GAAAGAGCGT CGAGCAGACC
GAGCGCGATT TGAAGGCGCT GTTTCCGGAG GCGCGCTGGA ACAAGCTGCA CCTCCAGTTC
ATTTATTATG GCCGGGAGCA CTGCACTGCG CGCGGCTGCG ATGGCACGAT CTGCGAAATT
TGCCGGACGC TGTTTCCCGA CCGCAAACGC GCCGTGACGA CGCGGAAGTA G
 
Protein sequence
MTRQERAAYV DRRLAELYPD PKIPLDHQDA FTLLIAVLLS AHTTDRSVNK ATPELFALAD 
TPEKMARVPV KEIERIIRPV GLFAAKSKAI AGLARMLMEK HGGQVPRTFE ELEELPGVGH
KTASVVMTQA FGVPAFPVDT HIHRLAQRWK LTSGKSVEQT ERDLKALFPE ARWNKLHLQF
IYYGREHCTA RGCDGTICEI CRTLFPDRKR AVTTRK