| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1916 |
|---|
| Symbol | |
|---|
| ID | 6204949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2405494 |
|---|
| End bp | 2406705 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641691564 |
|---|
| Product | lysine 2,3-aminomutase YodO family protein |
|---|
| Protein accession | YP_001818799 |
|---|
| Protein GI | 182413733 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTACC ACGATAACCG CACAGCCTGG TTCGAGGGCC AAGGGCTGTG GCAGCACATT
CCCGAATCCG ACTGGCGCGA CTGGACGTGG CAGTTGAAGA ACCGGCTCAC CAGCGTGGCC
GAGCTCGAGC GTTACATGAC CCTGACGCCC GAGGAGAAGG CCGGGTGCCT GTTCGCGAAT
CACAAACTGT CGCTCGCGAT CACGCCCTAC TTCTTCAATC TCATCGACCG CGAGGATCCG
AACTGCCCGA TTCGCAAGCA GGTGATCCCG CGGGCTGGCG AGATGCAGGT TTCGGCCGAG
GAGCAGCTCG ACTCGCTGGG CGAGGACGCG CATTCGCCGG TGCCCGGACT GGTGCATCGG
TATCCCGATC GCGTGCTGTT CCTCGTCACG GATCGCTGCG CCTCCTATTG CCGCTACTGC
ACGCGCAGCC GACTGGTATC GAACGCGCAG GACTACAATT TCCATCCGGA ATACGAGCAG
GGCCTTCGCT ACATCGAGGC GCACCCGGAG GTGCGCGACG TGCTGCTCTC GGGCGGCGAT
CCGTTGCTCC TGTCCGACCG GAAGCTCGAG CATCTGATCA GCCGGCTGCG GGCGATCCCG
CATGTGGAGT TCATCCGGAT CGGCTCGCGG ATTCCCGTTT TCCTGCCGCA ACGGATTACG
CCGGAGCTGT GCGAGGTTTT CAAAAAACAC GGCCCGATCT GGATGAGCAT CCACGTGAAT
CACCCGAAGG AGGCCACCGC CGAACTCAAG CAGGCGTGCG ATCGGCTGTC GTTCGCCGGC
GTGCCACTGG GCAATCAGAG CGTTTTGCTC AAGGGCGTGA ACGATGACGC CGAGGTGATG
AAGGCGCTCG TGCACCGGCT GCTGCGGATG CGGGTGCGGC CCTACTATCT CTACCAGATG
GATCTGATCA CGGGCGGGTC GCACTTCAAA GTCGATGTGC GCAAGGGCAT CGAGATCATC
CAGGCGCTGC GCGGGCATAC CACGGGCTAC GCCATCCCGC AGTACGTGAT CGATGCGCCC
GGCGGCGGCG GCAAAGTGCC GATCAATCCG GATTACCTCG AAAAAATCAC CGACGAGGAA
GTGGTGTTTC GGAATTTCGA AGGCCGACGG TTTACGTATC CGCTGAAGAG CACGCCTGTG
CCTTCACCGG CGGGCGCACC CTCTGCCGAG CCGGTCTCCG AGCCGGTCGC ACTGCCGGCA
ATCCGACCGT AG
|
|---|
| Protein sequence | MSYHDNRTAW FEGQGLWQHI PESDWRDWTW QLKNRLTSVA ELERYMTLTP EEKAGCLFAN
HKLSLAITPY FFNLIDREDP NCPIRKQVIP RAGEMQVSAE EQLDSLGEDA HSPVPGLVHR
YPDRVLFLVT DRCASYCRYC TRSRLVSNAQ DYNFHPEYEQ GLRYIEAHPE VRDVLLSGGD
PLLLSDRKLE HLISRLRAIP HVEFIRIGSR IPVFLPQRIT PELCEVFKKH GPIWMSIHVN
HPKEATAELK QACDRLSFAG VPLGNQSVLL KGVNDDAEVM KALVHRLLRM RVRPYYLYQM
DLITGGSHFK VDVRKGIEII QALRGHTTGY AIPQYVIDAP GGGGKVPINP DYLEKITDEE
VVFRNFEGRR FTYPLKSTPV PSPAGAPSAE PVSEPVALPA IRP
|
|---|
| |