Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1906 |
Symbol | |
ID | 6207827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2392875 |
End bp | 2395295 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641691554 |
Product | permease |
Protein accession | YP_001818789 |
Protein GI | 182413723 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC TTCGTTTTGC GCTGCGCCAG CTGAGGAAAT CGCCGGGCTA CACTACGATC GCGGTGCTCA CGCTCGCGCT CGGGATTGGG CTGAACACCT CGATCTTCAG CGTGCTGAAC CTGCTGCTGT TGGCGCCGCT GCCGTATCCA CAATCTGAAC GGCTCGTGCG CATTTACGCG AAGACCCCGC AGTCGGATGC GTGGGGACTC ACGCCGGTGG CTTACTACAC GTTGCGCGAC GCGAACCCAC AGTTCGGCCT GATGGGCGGT TTCCTCTGGT GGGGGGCCAC GCTCACTGAG CCGGACCGGC CGGCCGAGGT GCTGGTGTCG ATGCGCGTAT CGCCGGAGCT GCTGCCGACG CTCGCGGTGC CGCCGCTGCT TGGGCGGTGG TTCACGCGCG AGGAGGACCT GCCGGGCAGC CCGGTGATCA TCGTCAGCGA GTCGCTCTGG CGACGCTGGT TCAATAGCGA CCCGGACGTG ATCGGCCGGA GCGTGCGCGT GGACGGGCAG GCGGTGACGA TCGTCGGCGT GATGCCGGCC AGCATGGCGG CGCCGATCGT TTTCGGCGAC GTGGATTTCA TCCGGCCGAT GGGCCTGACG ACCGCAGAGC GTACCAGCCG CGTGGAGCAC TGGATGCACC TGGTGGCGCG GCTGCGGCCG GGGCAGTCGC TGGCGGCGGC CCGGGCGGAG ATGGATGCGC TCGCGATCCG GTTGCAGCGC GAACATCCGG AAGATTTCGC CCAGCTGGAG TTCAACGTGC TGCCGCTGCA CGCTTCGGGG GTGGATCTGG GTAGCCGGCA GGTGACGTGG CTGTCGCTGG GGCTGGCGGC GTTCGTGCTG GCGATCGCCT GTGCGAATCT GGCGAATCTC CAGCTGGTGC GGGCGAGCGG ACGCACACGG GAGTATGCGG TGCGGGCGGC GTTGGGGGCG TCGCGGGTGC ATTTGCTGCG GCCGCTGCTG TGGGAAGGAG CGGTGGTCTC GCTCGCGGGA GGCGTAGCCG GGCTGGTGGT GGCGCGGGTG TGCAACGGCT GGATCGGCGC GCACGTGGTG TTCAACAACA CGCATGTGGG CCACGCGCTG CCGCTCGACG GCCGCGTGTT GGCGTTCGCG ACGATCGCGT CGCTGATAAC CGGACTCGCC TCAGCCACAG CGCCGGCGTG GTGGATTGCG CGGGGTGCGC CGGGAGCGGC GTTGAAGGAG CAGGGACGCG GCGCGACGGC GAGTCGTGGA CAGCAAACGC TGCGGCGCGG GCTGGTGGTG GCGGAGTTCG CGCTGGCGCT GGTGTTGCTG GCCGGGGCTG GGCTGATGTT GGGCGGGCTG AATCGCTTTC TGCATCGAGA CATCGGCTGG CGACCGGAAG GCATCGTGCA CGGGTATGTG CCGACGCAAA CGCCGGGGTA TGCCCGGGAC GATGCGGTGG TGCATCGATT TTACGAACGC GTGCTCGAGC GGATGCGCGA ACTGCCGGGG GTGCAGTCGG CGACTTTTTC ATGGGAGTTG CCGATTGCGG GGTACAACAG CGCGCGGCGA TTCGTGGTCG ACGGCCGGCC GGCGGCGCAA GCGGGCGACG AGCCGGTGGC GTTTTTCAAC GGCGCGTTTC CCGGCTATTT CGAAACACTC GACATCGCGC TGCTCGCCGG GCGCGACTTC ACGCGGCACG ACGGGGCGGA CGCGCCGCGC GTCGCGATCG TGAATGAATC CCTCGCGCGC GCGTTCTGGC CGGGCGAGAG TGCGCTGGGT CGGCGCGTGA GCTGGGGCCC GCTGGACGCG CCGGTGTGGC TGGAAATCGT GGGCGTCGTG CGCGACGTGC AGTTCCCGGG CACGCTGACG CGGCCGGTGA CGCAGTTCCA AGTTTATGTG CCCTGCGCGC AGGAAGTGTG GCGGTGGGGG GCGTTTGCGC TGCGGACCAA GGTGGCACCC GAGGCGATGG TCGAATCGAT GCGGCGCGTC GTGGCTGAGG TGGATCGGGA AATTCCGATG TGGGAGCCGC GCGCGATGAC GACCGAGATC GACCGGCGGC TGGCGAACTC GACGTTGATC GGTCAGCTGC TCGGGGGAGT GGCCGTGCTG GGGCTCTTGC TCGCGGCGCT CGGAATTTAT GGGGTGATTG CCCAGACCGT GGTGCAGCGC ACGCCCGAGA TTGGTGTGCG ACTGGCGCTG GGGGCGGACG CGCGCGCGAT TTATCGGCTC GTGCTCGGCT CGGGGCTGAG ACTCGCGGTT GCGGGCGTGG CGTGCGGGAC GATCGGCGCG TATTTCGTGA GCCGGGTGCT GGCAAACCGG ATGCCAGAGC TGCCGCCGCC GGGCGGAGCC GTGCCGTTCG GGGCGATCGT CGCGCTGCTC GGCGCCGCGC TCGCCGCGTG CTGGCTGCCG GCGCGCCGGG CGATGCGCGT GGATCCGGTG ATCGCGCTGC GCTCGGAGTA G
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Protein sequence | MTDLRFALRQ LRKSPGYTTI AVLTLALGIG LNTSIFSVLN LLLLAPLPYP QSERLVRIYA KTPQSDAWGL TPVAYYTLRD ANPQFGLMGG FLWWGATLTE PDRPAEVLVS MRVSPELLPT LAVPPLLGRW FTREEDLPGS PVIIVSESLW RRWFNSDPDV IGRSVRVDGQ AVTIVGVMPA SMAAPIVFGD VDFIRPMGLT TAERTSRVEH WMHLVARLRP GQSLAAARAE MDALAIRLQR EHPEDFAQLE FNVLPLHASG VDLGSRQVTW LSLGLAAFVL AIACANLANL QLVRASGRTR EYAVRAALGA SRVHLLRPLL WEGAVVSLAG GVAGLVVARV CNGWIGAHVV FNNTHVGHAL PLDGRVLAFA TIASLITGLA SATAPAWWIA RGAPGAALKE QGRGATASRG QQTLRRGLVV AEFALALVLL AGAGLMLGGL NRFLHRDIGW RPEGIVHGYV PTQTPGYARD DAVVHRFYER VLERMRELPG VQSATFSWEL PIAGYNSARR FVVDGRPAAQ AGDEPVAFFN GAFPGYFETL DIALLAGRDF TRHDGADAPR VAIVNESLAR AFWPGESALG RRVSWGPLDA PVWLEIVGVV RDVQFPGTLT RPVTQFQVYV PCAQEVWRWG AFALRTKVAP EAMVESMRRV VAEVDREIPM WEPRAMTTEI DRRLANSTLI GQLLGGVAVL GLLLAALGIY GVIAQTVVQR TPEIGVRLAL GADARAIYRL VLGSGLRLAV AGVACGTIGA YFVSRVLANR MPELPPPGGA VPFGAIVALL GAALAACWLP ARRAMRVDPV IALRSE
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