Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1899 |
Symbol | |
ID | 6205797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2383846 |
End bp | 2386392 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641691547 |
Product | permease |
Protein accession | YP_001818782 |
Protein GI | 182413716 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCCG ACCTTCGCTT CGCCCTGCGG ACGCTGGCCA AGACCCCCGG CTTCACCGCA CTGGCCATCC TCACTCTCGC GCTGGGGATC GGCGCCAACG CGGCCATCTT CGCGCTGATT CACGGCGTCG TGCTGCGGCC GGTCGTGCCC GTCCGGCCGG ACGAGGTCGT CAACCTGTTC ACCGCGCGCC AGGGCGCGAG CCGCGATTAC CGGCAGTTCT CTCACGCTGA ATACCTGGCG CTGCGCGAGG CGCAGGACAC GTTCGCCGAC GTCGCCGCCA CCAACGCCGT GCTCACCGGC ATCGGCGAGG GCCAGAACGT CCGGCGCAGC TTTGCGTTCT TCGCCTCGGA AAACTTCTTC TCGATGCTCG GCACGACGCC CGCGGTCGGT CGGTTCTTCT CCGCCGACGA ATCGCGCCCG AACGCCAGCG TGCCCGTCCT CATCGCGAGC TACAACCTGT GGCAGCGCTT CGGCGGCCGG CCCGACTTCG TTGGCAGCAC GCTGCGCCTC AACGGGGCCT CCTATACGGT GATCGGGGTG ACGCGCCCCG GATTCAGCGG GCTCAACGCC CTGCTCGCGC CCGACGTTTG GCTGCCGCTC GGCCAGTTCG CGCAGTTCTC GCAACCTTTC GCCAGCGCGA CCGGCGTGCA GGACCTCGCC GATCCGCGCA CCTTCACGCT CAACCTCACC GCGCGGCTCG CGCCCGGCGT CACGCTGGCG AATCTCGGCA CGCGACTCCC TGCGCTGGCC CAGCGGCTCA ACGCCGTGCA GCCGGCCGAT CTCGCCACCT CACGCGAGCT GCAGTTCGAA CCGCCGTCGC GGTTCAGCAT CAGCACCACG CCGTCCGGCG ACAGCTCCGG TTTCATGCTC GCCGCCACGA TGTCGGGCAT GGCCGGCTGC GTGCTGCTGA TCGCCAGCCT CAATCTCGCG AACATGCTTC TCGCGCGCGG CTCGGCCCGC CGCCGCGAAA TCGCCGTTCG GCTCGCGCTC GGCGCCACGC GCGGGCGCAT CGTTCGCCAG CTGTTCGTCG AGGGCCTCGT GCTCGCGCTC ATCGGCGCCG CGCTCGGACT GCTGCTCGCG CTCTGGAGCA ACGACCTGCT GTTGAATTCA CTCCAGACGC TCTTCAGCAC GATGAATTTC TCGCTCGCCG TCGAATCGAC GCCGAGCCCG GCCGTGCTCA CGGCAACGTG CGTGCTCGCG CTGGTCGCCA CCGTGCTGTT TTCCGTCGGC CCCGCGCTGC GCGCCACCCG CGTCGATCTG GTGAACGACC TGAAGCAGCA GGGCGCGGCG AGCGCCGCGA CCGGACGGCT GAATCGCTTC TTCGCCCCGC GGCACCTGCT CGTCATGGCG CAGATCGCGC TTTCGCTGAT GCTGCTCTTT ACTGCGGGAT TGTTTTTCCG CGGGGCGCTC GCCGCCGGCG ACGTTCAGCT CGGGTTCGAA CCGCGCGGCC AGCTCGTGGC CGAGCTCGAT TTCTCGCTCT CCAACTCCGC GCCACAGCAG GCCGCCGCCA CGATGTTTAG CGCGCTGCAG CGCGTGCGCG AACTGCCCGG CGTCACCGCG GTCGCGATCG GCACCCAGCT GCCCTACGGC AACGTCACCG ACATGCCGCG TTTCGCCGAC GCCGCCGCCG CGCCCGCCGC GAAGACGAAC CCCGACTCGC CCGAGCCGGG CGTCGATGCG TTGCTCGGCG CCGTGACGCC GCAATATTTT GCCGCGCTCG GCGTCGCCGT GCTCCGCGGC CGCACGTTCA GCGACAACGA AGCCCAGGAC GACAAATCGC CGCGGGTGGC CATCATCGAC GAGGCTTTTG CGCGCAAGAT TTTCGGCGAT CAGGATCCGA TCGGCCGCCG GATCCGCTAT CTGCAGCCGC GCACCGACGG TACGCCCGCG GAGATGGAGA TTGTCGGCGT GTGCGGTTCG CACCGGCACG ATGCATTGCA GCGCACCGAT AGGCCACGTG TGTTCGTTCC CTTCTCTCAC GCTTATCAGC CGTCCGTCTT CATCCACGTG CGGATCGCTG CGCAGGACCG CGCGGCCGAA CTTGCCGCAC TCACCGCCGT CCGCGGGGCG CTGCTGTCCA CCAGCCCGGA TCTGCCGTTG CTCCTCCTGG CGCCGATGCG CGACCTGCTC GATCGCAACA TCCAGCTCTG GATCGTGCGG CTCGGCGCGG TGCTCTTCGG CGTCTTCGGC GCGATCGCGC TGCTCCTGGC CGCGATCGGC GTCTATGGCG TGAAGGCCTA CACCGTCGCC CGCCGCACGC GTGAATTCGG CATTCGCATC GCGATCGGCG CGCGGCCAGG CGACGTGTTC GCGTTGGTCA TGCGACAGGC CGTGCTCCAG ACGGTGTTCG CCGCCGCGAT CGGCCTGCTG CTCGCGCTGG CCGCCGGCCG GCTCGTCGGC CAGCTGCTCT ATCAGGTCAG CCCCTCCGAT CCGCTCGTGC TCGGCATCGC CGCCGCGTTT CTCACCGTCT CCGCCCTGCT CGCCTGCTTC GTCCCCGCCC GCCGCGCGAC GAAGGTCCAG CCGATCGAGG CGCTCCGGAC GGAGTAG
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Protein sequence | MLSDLRFALR TLAKTPGFTA LAILTLALGI GANAAIFALI HGVVLRPVVP VRPDEVVNLF TARQGASRDY RQFSHAEYLA LREAQDTFAD VAATNAVLTG IGEGQNVRRS FAFFASENFF SMLGTTPAVG RFFSADESRP NASVPVLIAS YNLWQRFGGR PDFVGSTLRL NGASYTVIGV TRPGFSGLNA LLAPDVWLPL GQFAQFSQPF ASATGVQDLA DPRTFTLNLT ARLAPGVTLA NLGTRLPALA QRLNAVQPAD LATSRELQFE PPSRFSISTT PSGDSSGFML AATMSGMAGC VLLIASLNLA NMLLARGSAR RREIAVRLAL GATRGRIVRQ LFVEGLVLAL IGAALGLLLA LWSNDLLLNS LQTLFSTMNF SLAVESTPSP AVLTATCVLA LVATVLFSVG PALRATRVDL VNDLKQQGAA SAATGRLNRF FAPRHLLVMA QIALSLMLLF TAGLFFRGAL AAGDVQLGFE PRGQLVAELD FSLSNSAPQQ AAATMFSALQ RVRELPGVTA VAIGTQLPYG NVTDMPRFAD AAAAPAAKTN PDSPEPGVDA LLGAVTPQYF AALGVAVLRG RTFSDNEAQD DKSPRVAIID EAFARKIFGD QDPIGRRIRY LQPRTDGTPA EMEIVGVCGS HRHDALQRTD RPRVFVPFSH AYQPSVFIHV RIAAQDRAAE LAALTAVRGA LLSTSPDLPL LLLAPMRDLL DRNIQLWIVR LGAVLFGVFG AIALLLAAIG VYGVKAYTVA RRTREFGIRI AIGARPGDVF ALVMRQAVLQ TVFAAAIGLL LALAAGRLVG QLLYQVSPSD PLVLGIAAAF LTVSALLACF VPARRATKVQ PIEALRTE
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