| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1896 |
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| Symbol | |
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| ID | 6205283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2375827 |
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| End bp | 2378259 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641691544 |
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| Product | permease |
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| Protein accession | YP_001818779 |
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| Protein GI | 182413713 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCCC TCCGCTACGC TTTTCGCTCG CTCGCGAAAT CGCCCGGCTA CACCGCCATC
GCGCTCGTCA CCCTCGCGCT CGGCATCGGC GTCAACACGT CGATGTTCAG CATCATCGAC
GCCCTGCTCT TCCGCGCCGC GCCGTATGCG GAGCCCGAAA AGCTCGTGCA GCTCACCGGG
CAACTCCAAT CCGGTCCGCT CTTCTTCGGC CGTTTCTCCG CCCAGGAGGT CCGCGAGATC
GCACCGCAGG CGACCGGCTT CGCCGCGCTG ACCGCCTACG ACCGCACGAT GGCCACGCTC
GCCGCTCCGG GCCAGCCGGC CGAGCGACTG CTCGCGATCC GTTTCACCCG TGGCGCGTTC
GAGACCTTGC GCGTCGCGCC GCTCCTCGGC CGCACGTTCA CCGCCGAGGA ATTCCAGCCC
GGTCGTGATC AGGTCGCGAT GCTCACCGAG TCGGCCTGGC GCGCGCGCTT CGCCGCCGAT
CCTGCGATCA TCGGTCGCAC GCTTCGGCTC GACGGCGAGA TCGTCACGAT CGTGGGCGTG
CTGCCAGCCC GCGCCGAGTA TCGAGTCTAT TGGGGCGGAG CCAGCTTGTG GCGGCCGCTC
AACTTCACGC CCGACCAGCT GAACTTTCGC GGCTACCGGC AGTTTTGGGT GATCGGCCGG
CTCCAGCCCG ACGTCACGCC CGCCGCGATC GAAGCGCAGC TCGCCCCGCT CGCGGCCCGA
CAGACGCAGG AGTTTCCCCG CGACTATCCG GGTCTTCACT ACGAGGCGGC GCCCCTGAAC
GAGCGCGTGC TCGACAACGT CCGGCGCAAT ATGTCGTGGA TGCTGCTCGG GCTCGCTGGC
TTCGTGCTGC TGATCGGCTG CGCCAATCTC GCCAATCTCC AACTCGCCCG CGCGACCGGC
TCCGTGCGCG ACTTCGCGAT TCGCGCCGCG CTCGGCGCCT CGCGGCGGCA CCTCATCGCG
CAACAGCTCA CCGAATCGCT GCTGCTCTCG CTCGCGGGCG GCGCGCTCGG GCTGCTGCTG
GCCGGCTGGC TCAACACGCT CGCCGAACAC GCGCTGCTCG TCGACGGCGC GCCCGGGTTC
ACCGTCGACA TCGACGCCCG TATCCTGGCG CTCACGCTGC TGATTTCGGT TTTCACCGGC
GTGCTCTTCG GTCTCGTGCC CGCGCTGATC GCTTCGCGGC CCAACGTCGT GGCGACCTTG
AAGGCGCAAG GGCGCGGCTC AACCGGCACC CGCAGCCAGC AGCGACTGCG TCATGCGCTC
ATCATCGGCG AGGTCACGCT CGCGCTGGTC CTGCTTGCCG GCGCCGCGAT CATCAACCGC
GGACTCGCCC GGATGCTCGC GCGCGAAAGC GGCTGGGACA CCGGGCGCGT GCTCACCGCG
ATCCTGCCGA TTCCCGAAAC TCGCTACCCG ACCGCCGCGC GTCGCGTGGA GTTTTTCCAT
CAGCTGGAGG AAAAGCTCGC CGCCATCCCC GGCGTCGAGC ACGCCGCCCT GGCCACGTCG
CTCCCATTGC TCGTCGACGG CACCACGCGA CAGGTGTTCG TCGACGCCCC GGCGGCCGAT
GGCAGCGCCG CCGGCATCGT GGCGGTCCAT CAGATGGTCA CCTCCGACTA TTTCTCGGCC
ATGGGGATCC GGCTGCTCGA GGGCCACGCG TTTCCGCGGG ATCTTCAGCC CGATGGTCCG
GCCTACATCC TCGTCAACGA AACGCTCGCG CGTCATTTCT GGCCCAACGA GAGCGCCGTG
GGCAAACGCC TCGGCAGCGT GCAGGAGGGC CAGCCGGTGT GGCGCGAAGT GATCGGCGTC
GTGCGCGACG TGGAGCCGGT CGCGAGCGCG GAGAACCCAA CCACCCGGCT CACCGTCTAC
CGGCCGCTCG TGCAGGAGCC GTGGTCCTAC GTCAACGTCG TGCTGCGCGC CGCTCCAGGC
ATCGGGGCGG TCGAAACCCT GGCCGAGCCG CTGCGGCGCG CGATCGCCGC GCAGGATCCC
GATCTCGCCG CGGATTTCGT CGTCAGCGTC CGCACCTACG TCGCCGCCGC GCAAAGCAAC
ATGATCCTCG TCGGCCGGCT GCTCATCGGG TTCGCCGTGC TTGGGCTCGT GCTCGCCGCG
GTCGGACTCT ACGGCGTCAT CTCCCACACC GTCGCGCAAC GGCTGCCCGA ATTCGGCATC
CGACTCGCGC TCGGGGCGCT GCCACGCGAC CTGCTCCGTC AGGTGCTGAT CCGCGGTGTG
CGACTGACGA CCTTCGGTCT GGCGCTTGGG CTCGTCGGCG CACTCGTGCT CGGCCGCCTG
CTCGGCTCGA TCATGCCCCG GCTCGCGCGA CCTGATCCGC TCGGCTTGGC GGGAGTCGTC
TTGCTCCTGT TGGTCGTGAC GGTCGTCGCC TGCTGGTTCC CGGCGCAGCG CGCCATGCGC
GCCAATCCGC TCGATGCGCT CCGCGCCGAA TAG
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| Protein sequence | MFPLRYAFRS LAKSPGYTAI ALVTLALGIG VNTSMFSIID ALLFRAAPYA EPEKLVQLTG
QLQSGPLFFG RFSAQEVREI APQATGFAAL TAYDRTMATL AAPGQPAERL LAIRFTRGAF
ETLRVAPLLG RTFTAEEFQP GRDQVAMLTE SAWRARFAAD PAIIGRTLRL DGEIVTIVGV
LPARAEYRVY WGGASLWRPL NFTPDQLNFR GYRQFWVIGR LQPDVTPAAI EAQLAPLAAR
QTQEFPRDYP GLHYEAAPLN ERVLDNVRRN MSWMLLGLAG FVLLIGCANL ANLQLARATG
SVRDFAIRAA LGASRRHLIA QQLTESLLLS LAGGALGLLL AGWLNTLAEH ALLVDGAPGF
TVDIDARILA LTLLISVFTG VLFGLVPALI ASRPNVVATL KAQGRGSTGT RSQQRLRHAL
IIGEVTLALV LLAGAAIINR GLARMLARES GWDTGRVLTA ILPIPETRYP TAARRVEFFH
QLEEKLAAIP GVEHAALATS LPLLVDGTTR QVFVDAPAAD GSAAGIVAVH QMVTSDYFSA
MGIRLLEGHA FPRDLQPDGP AYILVNETLA RHFWPNESAV GKRLGSVQEG QPVWREVIGV
VRDVEPVASA ENPTTRLTVY RPLVQEPWSY VNVVLRAAPG IGAVETLAEP LRRAIAAQDP
DLAADFVVSV RTYVAAAQSN MILVGRLLIG FAVLGLVLAA VGLYGVISHT VAQRLPEFGI
RLALGALPRD LLRQVLIRGV RLTTFGLALG LVGALVLGRL LGSIMPRLAR PDPLGLAGVV
LLLLVVTVVA CWFPAQRAMR ANPLDALRAE
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