| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1889 |
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| Symbol | |
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| ID | 6205291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2358497 |
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| End bp | 2360908 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691537 |
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| Product | permease |
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| Protein accession | YP_001818772 |
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| Protein GI | 182413706 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.727475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACC TCCGCTACGC CTTCCGCAGT CTGCTGAAGT CTCCGGGCTT CGCCCTCATC
GCGATCGTCA CGCTCGCGCT CGGCATCGGC GTCAACTCGT CGATGTATTC GTTGATGAAC
ACGCTGATGT TCGCCTCGGC GCCGTTCCCC CGCCCGGAGT CGATCGTCAA CCTCAACGGC
CAGACGCCGC AGGCGGAGTT CCTCCGCCTC TCCGTGCCGG AGATCGAGGA ATTGCGGGCG
CATCAGAGTC CGGCCTTCGC CGTGATCGCC ATGCAATCCG GCCTGCTGGA AACCGTCACG
CTGCCCGGCC AGCTGCCGGA ATCCATGCAG GGCAACGCGG TCGACGCCGC GCTCTTCAAG
GCGCTCGAAA CGCCGCCGCT GCTGGGGCGC ACCTTCTCCG CCGACGAATG CGTCGCCGGC
CGCGACGCGG TTGTCCTGAT CACCGAAAAT CTGTGGCGGC GGCAGTTCGG CGCAAATCCG
GAGGCCGTCG GTCAGACCAT GCGAATCAAC GGCCGCGTGT TCACGATCAT CGGCGTGCTG
CCAGAGCCCT ACTCGACGAT TTTTATGTTT GGCGAAGGCC AGTATTTCCG TCCGCTGGTG
CCCGCCGACA ACCAGGTGAC CGCGCGCGAC CGCCGCGAGT TCGGCGTGGT CGTGCGCCTC
ACCCCCGGCG TGACCCCCGT GGCGGCGCTC GCCAGCATCG CGCCCCTGGC GGAACGGTGG
GCCAAGGATC ATCCGCGGCT GTATCAGAAT TACCATTTTC GAATGCAGCT TGCCGGCCGC
GTCGGCGGCT CGGCCAACGT CGCGATCCTC ACGCTGCAGA TCGGTCTGGC GGCTGCCATC
CTCGCGATCG CGTGCGCCAA TCTCGCCAAC CTGCAAATGG CCCGCGCCGC CAGCCGGCTC
CGCGATCTGG CGATTCGCTC CGCGCTTGGC GCCAGCCGAT GGCGGCTCAT CCGTCAGCAG
CTCGTCGAGT CGCTGTTGCT GTCCGTCATC GGCGGCGCGC TTGGCCTGCT GGTCGCGCAC
TGGAGCAATC TGCTCATCGG CCGGAATATT CGGCTCGGGC TCTTCAGCAC GCTCCATCTG
CCCATTGACG GGCACGTGCT CGCGTTCAAC GCCGCCATCT CGATCGTCGC CGGCCTCGGC
TTCGGCCTCG TCCCCGCCTG GCTGGCGGCG CGAGCCGACA TCAACGACAT CCTGAAACAG
CAGACGCGCG GCACCACCGG CGGTCGCCAC CAGGGCTGGA TCCGCGGGTT GCTCGTCGTC
GGCCAGGTGG CGCTGTCGCT CGCGCTCCTC TCCGTCGCCG GCATGATGAT CTACGGACTC
GACCGCACGC TGAACGCGCG CCCGAGTTGG GACACCGAGT CGATCCTCAC CGCCAACCTG
CAGGTGGACG AACGCTCCTA TAACACGGAG CAAACCCGTG CCTTCCAGGA CGAGATCATC
CGCCGGCTCT CCGCCATTCC GGGCGTCGAG GTCGCCGCCA TCGCGTCCAC GCTACCGATC
GGCGGCAGCA CCGCGGGCAA TGATATCTTC AAGGAAGGCC AGGACTCGAG CCAGACCAAC
TTGCCCAAGG GTAGCGGATA TCTCATTACG CCCGGGTTTT TCAAGGCGCT CGGGATTCGC
GTGCTTGAGG GCCAGACCTT CCCCGAAAAC GTCTCGCACA CCTCACCCGA GCGGGTGGTG
GTCAACAAGT CCCTGGCCGA TAACTTCTGG CCCAAGGAGA GCGCCATCGG CAAGCGCCTC
GGCACGCGGG CCGGTGACGG CAAAACCACG CTGCGCGAGG TGATCGGCGT CGTCGCTGAC
GTGGAGGACG CCATCAACTT CACCGAACCC GTCGCGCGGA TGCAGTATTT CACCCCGATG
ACGCACACCC CCTGGTCGTA TTTCCAAGTC GTGATTCGCG GGCCGAACCC GAAGCGCTTC
GACGGTGACC TGCGCCGCGC CATCGCCCAG GTCTCGCCCG ACGTGGCTCC CCGATTCATT
TGGACGCTGG CGGATATGCG CGATCAGTTC CTGCACAATC TGGTCGTGAT CAATGGCGTG
CTATTCGCGT TTGCGCTGCT CGGGCTCGTG CTCGCAAGCG TTGGGCTCTA CGGCATCGTC
TCGCACAACG TCAGCCAGCG CATGGGCGAG TTCGGCATCC GGGTCGCCCT CGGCGCGCGC
CAGATCGACG TCATGGGTCT GGTCCTGCTG CGCAGCCTGC GATTGACCCT TGTCGGCTTG
GCGATCGGCG CGGTCGCGGC CTATGCGCTC GGACTCGCGT TGCGGCAGAG TCTCGGCCCG
CTGATTGCGC AGAACTACAC GATTCTCGGG CTCACGTGCA TCGCGATCTT CGTCGTCGCC
TTCGTTGCCA CCTGGCTGCC CGCCCGTCAG GCCGCCACCG CCGATCCCGT CGAGGCGCTC
CGGGCTGAAT AG
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| Protein sequence | MFNLRYAFRS LLKSPGFALI AIVTLALGIG VNSSMYSLMN TLMFASAPFP RPESIVNLNG
QTPQAEFLRL SVPEIEELRA HQSPAFAVIA MQSGLLETVT LPGQLPESMQ GNAVDAALFK
ALETPPLLGR TFSADECVAG RDAVVLITEN LWRRQFGANP EAVGQTMRIN GRVFTIIGVL
PEPYSTIFMF GEGQYFRPLV PADNQVTARD RREFGVVVRL TPGVTPVAAL ASIAPLAERW
AKDHPRLYQN YHFRMQLAGR VGGSANVAIL TLQIGLAAAI LAIACANLAN LQMARAASRL
RDLAIRSALG ASRWRLIRQQ LVESLLLSVI GGALGLLVAH WSNLLIGRNI RLGLFSTLHL
PIDGHVLAFN AAISIVAGLG FGLVPAWLAA RADINDILKQ QTRGTTGGRH QGWIRGLLVV
GQVALSLALL SVAGMMIYGL DRTLNARPSW DTESILTANL QVDERSYNTE QTRAFQDEII
RRLSAIPGVE VAAIASTLPI GGSTAGNDIF KEGQDSSQTN LPKGSGYLIT PGFFKALGIR
VLEGQTFPEN VSHTSPERVV VNKSLADNFW PKESAIGKRL GTRAGDGKTT LREVIGVVAD
VEDAINFTEP VARMQYFTPM THTPWSYFQV VIRGPNPKRF DGDLRRAIAQ VSPDVAPRFI
WTLADMRDQF LHNLVVINGV LFAFALLGLV LASVGLYGIV SHNVSQRMGE FGIRVALGAR
QIDVMGLVLL RSLRLTLVGL AIGAVAAYAL GLALRQSLGP LIAQNYTILG LTCIAIFVVA
FVATWLPARQ AATADPVEAL RAE
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