| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1883 |
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| Symbol | |
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| ID | 6205280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2344540 |
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| End bp | 2346966 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691531 |
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| Product | permease |
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| Protein accession | YP_001818766 |
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| Protein GI | 182413700 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.142413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGACC TCCGCTTCGC TCTCCGGCAA CTCGCCAAGG CTCCTGGCTT CACCGCCATC
GCCGTGCTCT CGCTCGCGCT CGGCATCGGC GCCACCACCA CCGTGTTCTG CTGGATCCAA
GGCATCCTGC TCAACCCGCT GCCCGGCGTG CACCGCCAGG AGGAGATCGT CGTGCTCACC
ACCTCGCACG CGGACCAGAT GTGGGACACC TGTTCGCTGC CCGATATCAA GGACTATCGC
GAACAGCGCG ACGTGTTCGC CGGCATCATC GCCTCGCAGG TCACGCCCGC CTGCCTGACC
ATCGGCGAGC AGTCGACGTG GCTCTATGGC CAGATCGCGA CAGCAAACTT TTTCGACCTG
CTCGGCGTGC AACCGCTGCT CGGCCGGCTG TTTCTCCCCG ACGAGGATCA GAAACCAGGC
GGCAATCCGG TGCTCGTGCT CGGCGAGCGG TTCTGGCGAC GCCAGTTCAA CGGCGATCCG
AGCGTGATCG GCAAGGCCGT TCAGCTCAAC CGCCACGCGT TCACGGTCAT CGGCGTCGCG
CCGGCCTCCT TCCGCGGCAC GATGAGTGGA TTGATCTGCG ATTTCTGGGC GCCGCTCTCG
ATGCACCACG CAGTGGCCAA CATGGGCTCG CTCGAGCAGC GCGACGATCA CTGGCTCCAC
ACGCAAGCCC GGCTCCAACC CGGCGTCAGC CGCGAGCAGG CGCAGGCCGT CGTCGATGCC
GTCGCCGCGC GCCTGGAGAA GTCTTATCCG AATACCAACC AGCAGATCCG ACTTCACGTG
CTCGATTTCC TTCATGCGCC CTACGGGGTG CAGCCGATCA TGGGCCCGGT GCTGGCCATT
CTGCTCGCCG TGAGTCTCGG CGTCGTGCTG ATCGTTGCCG CCAACCTCGC CAGCCTGCTG
CTGGCGCGCG CCGCCGGCCG GCAAAAGGAA ATCGCCATCC GACTCGCCGT CGGCGCCAGC
CGCGTCCGGC TCGTGCGCCA GCTGCTCACG GAAAGCCTGC TGCTCGCCGG CCTCGGCGGC
GGACTCGGCA TCGTCATCGC GTTCTGGGCC GTGGATCTGC TGAAGCGCTG GCAGCCGCCG
ACTCCGCTGC CGATTGGCAT CGGCACGGAG ATCAACACAA CCACGCTCGC GTTCACCGTA
TGCGGCTCGA TCGTGACCGG CGTCCTGTTC GGATTGATCC CGGCCTTGCG CGCTTCCCGG
CCCGACCTCA ACTCCACGCT GAAGGATGGC GGCCGCACGT CTTCCAGCGG TTCCTCGCAC
CAGCGGTTGC GCAGTCTGCT CGTGCTCGGC GAAGTCGCGC TGTCGCTCGT CCTGCTCGTC
GGCGCCGGCC TGTGCATCAA GAGCGCGCAA CGTGCCTACC ACGCCGAACT CGGTTTCAAA
CCCGACCGCG TGCTGCTCGC CGGCCTCCGC ATCGGCATGA ACGGCTACAA CGAAGCCACC
GGGAAAGTCT TCTACGCCCG GCTGCAGGAG CGGCTCGCCA GGCTGCCCGG CGTCGAGTCC
GTCGCGCTCA GCAGCTGGTT CCCGCTGGGC TTCGAGGGCG GTCCGCAACA CGGCGTCACC
GTCCAGGGCC ATGAACAAAA ACCCGGCGAG GATTCGAGCC TTCCCTACAG CATCGTGTCT
CCGGGCTATT TCGCGACGCT CGGCATCCCG CTCGTCGACG GCCGCGACTT CACCGATCAC
GACGACGACT CCGCGCTCAA GGTCGCGATC ATCAACGAAA CGATGGCGAA GCGGTATTGG
CCCGGCCAGA ATGCGATCGG CCACAAATTC AAAGCCGCTT GGCGCGAGCT CACCGTGGTC
GGCGTCGCGA AAGACGGAAA ATACCGGTCG CTCAACGAAC CGCCACGCGG TTTCTTCTAC
ACCCCGTTCC GCCAGGGTGT GTGGGATCTC AATCTCGGAC TGTGCCTGCG CACCCGAGGC
GATCCGTCGC TTTTCGGTGC CACGCTCCAG CGCGAGCTCC GCCAGCTCGA TCCCAACGTC
GCGGTCTGGG CCACGATCAC GATGGACGAC TACATCAAGG CGGCGTTCAT GGCGCCGGTC
CTCGCTTCGC GATTGCTCAC CTGGCTCGGG ATCGTCGCGC TCGTGCTCGC CGCCATGGGC
GTCTACGGCG TGGTCGCCTA CGTCGTCAGC CAGCGCACGC AGGAATTCGG CGTGCGCATG
GCGCTCGGCG CCAGCACCGG CGACGTGCTC CGACTGGTCA TCGGCCAGGG CATGCGCGTC
GCCGTGTTGG GTATCGGCGT CGGCCTGCTC GGCGCGTTCG CCGTGACGCG CCTGCTCGCC
GGCTTCCTCT ATGGTGTGAG CCCATTCGAC GCGCTCACCT TCGGTGCGGT CACGCTCGGC
CTGGCGCTGG TGTCGCTTCT CGCCTGCTGG CTGCCGGCGC GTCGCGCAAC GAAAGTCGAT
CCGGTTGACG CGCTACGAGC GGAATGA
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| Protein sequence | MSDLRFALRQ LAKAPGFTAI AVLSLALGIG ATTTVFCWIQ GILLNPLPGV HRQEEIVVLT
TSHADQMWDT CSLPDIKDYR EQRDVFAGII ASQVTPACLT IGEQSTWLYG QIATANFFDL
LGVQPLLGRL FLPDEDQKPG GNPVLVLGER FWRRQFNGDP SVIGKAVQLN RHAFTVIGVA
PASFRGTMSG LICDFWAPLS MHHAVANMGS LEQRDDHWLH TQARLQPGVS REQAQAVVDA
VAARLEKSYP NTNQQIRLHV LDFLHAPYGV QPIMGPVLAI LLAVSLGVVL IVAANLASLL
LARAAGRQKE IAIRLAVGAS RVRLVRQLLT ESLLLAGLGG GLGIVIAFWA VDLLKRWQPP
TPLPIGIGTE INTTTLAFTV CGSIVTGVLF GLIPALRASR PDLNSTLKDG GRTSSSGSSH
QRLRSLLVLG EVALSLVLLV GAGLCIKSAQ RAYHAELGFK PDRVLLAGLR IGMNGYNEAT
GKVFYARLQE RLARLPGVES VALSSWFPLG FEGGPQHGVT VQGHEQKPGE DSSLPYSIVS
PGYFATLGIP LVDGRDFTDH DDDSALKVAI INETMAKRYW PGQNAIGHKF KAAWRELTVV
GVAKDGKYRS LNEPPRGFFY TPFRQGVWDL NLGLCLRTRG DPSLFGATLQ RELRQLDPNV
AVWATITMDD YIKAAFMAPV LASRLLTWLG IVALVLAAMG VYGVVAYVVS QRTQEFGVRM
ALGASTGDVL RLVIGQGMRV AVLGIGVGLL GAFAVTRLLA GFLYGVSPFD ALTFGAVTLG
LALVSLLACW LPARRATKVD PVDALRAE
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