| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1869 |
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| Symbol | |
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| ID | 6207760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2320611 |
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| End bp | 2323046 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691517 |
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| Product | permease |
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| Protein accession | YP_001818752 |
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| Protein GI | 182413686 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC TTCGCTTCGC GCTCCGCCAG CTCGCCAAGT CGCCCGGATT CACCGCGATC
GCCGTGCTCA CGCTCGCGCT CGGCATCGGC CTCAACACGG GAATCTTCAG CGCGCTGAAG
GGCGTCGTTC TTCGGCCACT CGCCGGCGTT CCTGACTCGC GTGGCCTGGT CACCGTCTAC
TGGACCACGC GCGGCGGCGA CCGGTTGACG CTGTCCTACG TCGAGCTGCG CGAGTTTCAG
CAACGCGCGC GCTCGCTGAC GCAACTCGAA GCAACGGGCG CGATGACGTT CAGCCTCGAT
GACGGCGTGC TCGCGCGCCG CGTGTGGGGC GAATACGTCA CCGGCGGGCT GCATGCTATG
CTCGGCCTCC AGCCCCACCT CGGTCGATTG CTCCAGCCGG AGGACGATCA TTTTCCCGGC
GGTGCGCTGG TGCTCGTGCT CTCGCATCGC TACTGGCAAC GTCGGTTTGG CGGCGATCCC
ACGATCGTCG GTCGCGGGGT GCGATTGAAC GGTCGACTTT GCACCATCGT CGGCGTCGCC
CCGCCAGACT ACCTTGGCAC GACCGTTGGC TTCGGACTCG ATGTGTTCGT TCCGGTCGCG
GCGGCGGAAC AGCTGCGGCC GTTCGGCGGC AACGGCACCG ATCTGTTCAC TAAGCGCGAT
TTTCGCACGC TCGCGACCGT GGCGCGGCTG CGGCCGGGCG TCAGTTTCGA ACAGGCTCGG
GCGGAAATCG CGGCGATCAG CGCTGCGCTC GCGACGGAGT TTCCCGCAGA ATACCAGGGC
AAGAGCGCCA TTCTGGTTCC GTTCACGCGT TCGCCGTTCG GCGCGCAAAC CTACATGACG
CCGATCTTCT CGCTGATGCT CGGCATGGCC GCGCTTGTCC TACTGATCAT GTGTGCCAAC
GTCGCCAACC TGCTCCTGGC GCGCGCCGCC AGCCGCATCC ACGAGGTCGC CATCCGGCTT
GCGCTCGGGG CCAGTCGACT CCGGCTGGTT CGTCAATTTC TGACCGAGAG TGTGGTGCTC
GCGCTGCTGG GTGGCGCGCT CGGCGGCCTG ATCGCCTCCG GCACGCCGGA GCTCCTGCGT
GCGGTGTGGC CGGATACCGC GAAGACGCCG GTGGTGCTGA ATGCCGAACC TGATGCGACC
GTGTTCGCGT TCACGCTCGC CGCCTCGCTG GGCAGCGCCC TGCTGTTCGG ATTGTTGCCC
GCCCTGCAGG GCGCCCGGAC GGTGGTGTTG CCGGCGCTGA AGGCCGGGCC CGCGAACGGC
TCGCCCACGC GCACATGGGG CCGCAGCGCC TTGGTCGTGG CGCAGATCGC CGTCTCCGTT
CCGCTGTTGG TGATCGCCGG GTTGCTTTTG CGCAGCGCAC AGCGACAGAA GTCCGCGGAC
TTCGGCTTCG ATCCAGCGCA CGTCGCGCTG ATGTCGATCG ACCTGCGGCC AAATGGCTAC
GACCAGGAGA ACGGCCGCGA TTTTTGTGAC CGGCTTCTGC ACGAACTCGG CCGTCTGCCA
GGCGTCGAGG TCGTGAGCCT CGCCAACCAG CTGCCGCTGG AAATCGTGCC ACGCACCCAG
AGTGCGATCG AGGTCCCCGG CTATGTCCCC CCGCCGGAGG AAGCGCTCCA GGTGATGTTC
AACACGGTGA CGGCGGACTA TTTTCGGACG CTGCGCATCC CGCTGGTCGC CGGACGGGAT
TTCGCGGCAG CCGATCGGAA CAGCGCCGCC AAGGTCGCCA TTGTCAACGA AACGATGGCC
GCGCGCTATT GGCCGCACCA GAACCCGCTC GGCCGGACCT TCCGCGTTTG GGGCGAGACA
CGCGAAGTGA TCGGCGTGGT GCGCAACGTT AAATATCTCA CGCCCACCGA ACCGCCGCAC
CCGTATTTCT ATCTGCCGCA AAGCCAGTCG TTCCAATCCG ACCTGACGAT TCAGGTGCGC
ACCAGCGGAG ATCCCCGGTT GCTGATCAAA CCGATGATCG ACTGCATCGC TCAACTTGAT
CCACGACTGC CGGTATTCGG CGTGGAGACG ATGGCCGACT ACATGAAGTT CGCTCTGTCG
ATTTCGTCGT TCGCCGCCAA CGGTCTCCTG CTGGCCGGGC TGCTCGGGCT GACGCTCACC
GCGCTCGGCG TGTTCGGCAC GATCAGCTAC GCGGTGGCGC GGCGCACACG CGAAATCGGC
GTGCGGATGG CGCTCGGAGC GCGAACCACC GACGTCGTCC AGCTGGTGAT CCGCCAAGGT
CTTTGGCTCG CCGCGATCGG CGCCGTGCTC GGGCTGATCG GCGCTGCGGC CTCCACGCAC
CTCGTCCGCA GTTTCCTCTT TGAAACCACC ACGTCGGACC CACTCACCTA TCTCGCGGTG
CTCCTCCTCG TCGCCGTCAC GACGCTGCTC GCCTGCTGGC TGCCAAGCCG CCGGGCCACC
CGCATCAATC CCACCGACGC GCTGCGCGCC GAGTAG
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| Protein sequence | MSDLRFALRQ LAKSPGFTAI AVLTLALGIG LNTGIFSALK GVVLRPLAGV PDSRGLVTVY
WTTRGGDRLT LSYVELREFQ QRARSLTQLE ATGAMTFSLD DGVLARRVWG EYVTGGLHAM
LGLQPHLGRL LQPEDDHFPG GALVLVLSHR YWQRRFGGDP TIVGRGVRLN GRLCTIVGVA
PPDYLGTTVG FGLDVFVPVA AAEQLRPFGG NGTDLFTKRD FRTLATVARL RPGVSFEQAR
AEIAAISAAL ATEFPAEYQG KSAILVPFTR SPFGAQTYMT PIFSLMLGMA ALVLLIMCAN
VANLLLARAA SRIHEVAIRL ALGASRLRLV RQFLTESVVL ALLGGALGGL IASGTPELLR
AVWPDTAKTP VVLNAEPDAT VFAFTLAASL GSALLFGLLP ALQGARTVVL PALKAGPANG
SPTRTWGRSA LVVAQIAVSV PLLVIAGLLL RSAQRQKSAD FGFDPAHVAL MSIDLRPNGY
DQENGRDFCD RLLHELGRLP GVEVVSLANQ LPLEIVPRTQ SAIEVPGYVP PPEEALQVMF
NTVTADYFRT LRIPLVAGRD FAAADRNSAA KVAIVNETMA ARYWPHQNPL GRTFRVWGET
REVIGVVRNV KYLTPTEPPH PYFYLPQSQS FQSDLTIQVR TSGDPRLLIK PMIDCIAQLD
PRLPVFGVET MADYMKFALS ISSFAANGLL LAGLLGLTLT ALGVFGTISY AVARRTREIG
VRMALGARTT DVVQLVIRQG LWLAAIGAVL GLIGAAASTH LVRSFLFETT TSDPLTYLAV
LLLVAVTTLL ACWLPSRRAT RINPTDALRA E
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