| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1856 |
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| Symbol | |
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| ID | 6206850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2307606 |
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| End bp | 2310269 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691504 |
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| Product | permease |
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| Protein accession | YP_001818739 |
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| Protein GI | 182413673 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGG AACTCCGCGC GCATCTAGAC CGCGAGACCG AGCAAAACCT CGCCCGCGGC
CTGTCGCCGG CCGACGCCCG CTACGCTGCG CTGCGCGCGT TCGGCGGCGT CGAGCAGATC
AAGGAGCGCG CGCGGGACGA CCGCGGCTTC GTCTGGCTCG AGCAACTCGC GCAGGACATC
CGGCAGGCCG CCCGGCAACT GATGCGAGCG CCCGGCTTCA CCGCCACCGT CGTGCTCACG
CTCGCGCTCG GCTTGGGCGT GAACACGAGC GTATTCCTCC TGGTGAGCGA CTTCTTCCTG
CGCCCGCTGG CGGTGAAGGA GCCAGGAGAA CTCGTCCATG TTCTCCAGAA AAGTCCTCGG
TTCGGATTCC CGCTGAACCT GTCCTTCCCT GATTTTCTCG ATTTTCGAAA AGCGATCGCG
ACGGACGGCG AAACCGATGC CGCGATGGCG GCGGCTTTTT CCGACGTGCT CGCATACCAG
CAGCTCACGG TGTCGTTGGG CCGGACGGAC GCCGGGGCCG AGCGAACGTG GATTGCTGCG
GTGAGCGACA ACTTCTTTTC GGCCTTGGGC CTGGAGCCGG CGCACGGTCG GTTGTTCGCG
GCCAACGAGG GCCGCGTCCC CGGCGCCGAT CCGATCATCG TGTTGACGGA AGCCTGCTGG
CGCAGCCGCT TCGGCGGCGA TCCTCGCGTC ATCGGTCAGC CGGCGACGAT CAACGCGCTC
ACCTTCACGA TCGTCGGCGT CACCCCCACG GGGTTTCACG GCGCCCAGTG GTCCGACGCC
ATGAGCGGTT TCGTGCCCGC CTCGATGTTG CCCGTGCTGC AGCCGGCCAA CGGCGGCGTG
TTGGACAATC GCGGTCAGTT GGCCTTCAAC GTCATCGCGC GCCAGCGCCC GGAGGTGACG
CTGGAGCAGG CGCAATCCGC AGCCGAAGTC GTCCTCGCGC GGCTTATCGC GACCTACCCG
GAATACCACG CACCGGCACG AGCCCAGCTA CTGCCCGAAC GGTGGAGTCG GCCCGCGCCC
AAAGCGTCCC GTTTCACCAT TTCCATCATG GCGGTACTGG CGATTGGCGC GTTGCTGGTA
CTGGGCATGG CGGTCGCGAA TGCGGCCAAT CTGCTGTTCG CGCGCGCCGT GGCGCGCGAG
CGCGAGTTGG CGGTGCGCGG TGCGCTCGGC GCCTCGCGCT GGCGGTTGCT CCGGCCCCTG
CTCGTCGAAG CCGTGCTCAT GGCAATCCTC GCCGGCGCGT TTGCGCTGGT CCTGGCGGAT
TGGGTGGATG CGTGGCTGAG GTCGCTGCTG GCTGTGTTGG GCGACATTCC GCCGTTGGCC
GAGCACGGCG CGGACTGGCG CGTCTTCGTC TTCACCGGTG GGATGGCGCT CGTCGCCGGC
GTGCTGGCAG CGCTCTGGCC CGCGCTCCGG GCGGCACGCC AGGACGTATT GCCGATGCTG
AAGGAAGCCT CGCCGACACC GGGGAAATCG CACCACCGGT TGCGGAGCCT GCTCGTCGTG
ACGCAGGTTA CCCTGGCGTG CATCGTCCTC ATCGCTGCAG GACTCGGCCT GCGCAGCACG
CGCGCGCTGG CCGGCGTTCA TCCCGGTTTT CGGTCCGACC ACCTGCTACT GGCTTCCTAC
GATTTGAGCC TGCAACGTTA CGTGTTGCGC AACGGTCTTC TGCGCGCGCA GCAATTTCAC
GCCGAGGTGC TCGACCGGGT CGCGCGGCTG CCGGGCGTGA AGAGCGTCAG CCTCGCCGAA
CGCGTGCCGT TCGACGTCGA TCCCAGTATG GCCGGAGATG TTGTTCCCCA AGGGCGGCGC
GGAGGTGACA ACACGCGTTT CCGGCTCACG CCCGTGCACG CCGTGACGCA CACGTTTCTG
GAAACGATGG GCATCCCCCT CGCGTCCGGC CGCGACTTTC GCGCCAGCGA CGACAGGAAT
GCACCGCCCG TCGCGATCGT CACCGAGTCG CTCGCGCGCC GGCTTTGGCC GGGCGAGCCC
GCCATCGGCC GCCGGCTCGT CATTAACGGC GGCGCGCCGA CTGAAATCGT CGGCGTGATC
CGTGATGGCA GGTTTGTCGC GCTAGCGGAC CCGTCTTGGG AAGCGGTATA TCTGCCCTTG
GCCCAAAACT TCCGCGGCGG CGTGACGCTC GTCGTGCGCA CCGAGGGCGA ACCACTGGCG
CTGGCGCAGG CGGTCGAGCG CCAGATCCGC GCGATGGAGC CCGATCTGCC CGTCTACAAC
GTCCGCACCA TGGAGCAACA GATCGCGCAG AGCCCGATGG CGTTGATGCC GCTTCGCTTT
GGCGCTGCGG TGGTGGGAAT GCAGGGATTG CTGGCGCTCG TGCTCGCGTT GACCGGTATC
TACGGACTGG TGTCGTTCCA TGTCGCCCGC CGCACGCGCG AGATCGGGGT GCGCATGGCC
CTCGGAGCCA CCGCCGCGAA CGTGGTCCGC GCGGTCGCGC AGCAGGGCGT CCGGCTGACG
CTCACCGGCT TGGCGTTGGG CCTGCCGCTC GCCTATGGTG CGATCTTGCC ATTGAAGGGC
CTCCTCTACG GCACCCCAGC GAACGACGGG CTCGTGTTTG CCGGCATCGG GTCGCTGATC
CTCATGATCG CGCTGTTGGC GAGCGGCATC CCGGCCTGGC GGGCCGCGCG CGTGAACCCG
GTGGACACGT TGCGCGCGGA GTGA
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| Protein sequence | MDEELRAHLD RETEQNLARG LSPADARYAA LRAFGGVEQI KERARDDRGF VWLEQLAQDI
RQAARQLMRA PGFTATVVLT LALGLGVNTS VFLLVSDFFL RPLAVKEPGE LVHVLQKSPR
FGFPLNLSFP DFLDFRKAIA TDGETDAAMA AAFSDVLAYQ QLTVSLGRTD AGAERTWIAA
VSDNFFSALG LEPAHGRLFA ANEGRVPGAD PIIVLTEACW RSRFGGDPRV IGQPATINAL
TFTIVGVTPT GFHGAQWSDA MSGFVPASML PVLQPANGGV LDNRGQLAFN VIARQRPEVT
LEQAQSAAEV VLARLIATYP EYHAPARAQL LPERWSRPAP KASRFTISIM AVLAIGALLV
LGMAVANAAN LLFARAVARE RELAVRGALG ASRWRLLRPL LVEAVLMAIL AGAFALVLAD
WVDAWLRSLL AVLGDIPPLA EHGADWRVFV FTGGMALVAG VLAALWPALR AARQDVLPML
KEASPTPGKS HHRLRSLLVV TQVTLACIVL IAAGLGLRST RALAGVHPGF RSDHLLLASY
DLSLQRYVLR NGLLRAQQFH AEVLDRVARL PGVKSVSLAE RVPFDVDPSM AGDVVPQGRR
GGDNTRFRLT PVHAVTHTFL ETMGIPLASG RDFRASDDRN APPVAIVTES LARRLWPGEP
AIGRRLVING GAPTEIVGVI RDGRFVALAD PSWEAVYLPL AQNFRGGVTL VVRTEGEPLA
LAQAVERQIR AMEPDLPVYN VRTMEQQIAQ SPMALMPLRF GAAVVGMQGL LALVLALTGI
YGLVSFHVAR RTREIGVRMA LGATAANVVR AVAQQGVRLT LTGLALGLPL AYGAILPLKG
LLYGTPANDG LVFAGIGSLI LMIALLASGI PAWRAARVNP VDTLRAE
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