| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1852 |
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| Symbol | |
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| ID | 6206814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2300954 |
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| End bp | 2303563 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691500 |
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| Product | permease |
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| Protein accession | YP_001818735 |
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| Protein GI | 182413669 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.155469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAT TCGACCGCTT CGTTGCGCTG TTTCGCCCCG GCCGGCTCGA CCGGGAAATG
ACCGCGGAAA TCGCCGAGCA TCTCGAACGC GAGACACAAC AAAACCTCGC GCGTGGGATG
CCGAGCGACG AAGCGAGGTT CGCCGCGCTC CGCGCGTTTG GCGGCGTCGA GCAGATCAAG
GAGCGCGAGC GCGACGCCCG CGGTTTCTTC TGGCTCGAAC AACTCGCGCA GGACCTCCGC
TATGCGCTGC GAATGCTGCG GCGGGATTCC GGGTTCACCG CGACCGTCGT CCTCACGCTC
GCGCTCGGCA TCGGCGGGTG CACGGCGGTG TTCAGCCTGG TCAACCACAT CCTGCTGCGG
GCCCTCCCGT ACGACGAACC GCAAAACCTG GTCCACCTTT GGGAAGACGC CTCCGGCAAG
GGCACCGGCC GAAACATCGT GGCCGGCGGC CAGTTCGGCG ACTGGCGCGC CCAGGCTACC
ACGCTGGAAA GCATCGCGGC GATCCGGCGC GAGAGCATGA ACCTCACCGG CCTGGGCGAG
CCGGAGCGAC TCGCGATCAC GAAGGTCTCC GCCAGCTACC TGCGGACGCT GCGGGTGCGT
CCCGCACTCG GCCGCGACTT TCAACCCGAC GAGGACCAAC CGGGCAAGGG CAACGTCGCG
ATCCTCAGCC ACCGGCTGTG GCAACAGTCG TTCGCAAGCG ACCCGCAGGT GGTGGGCCGC
GAAATCCTGC TCGACAGCGA GAGCTACACG GTCGTCGGCG TCCTCGCGTC CGACCCGCCG
TTGCCTTACG AGGGGGACGT GCTCCTGCCG TTCGTCTTCG GCACGCAACC CTGGCACCAC
GTGCGCGGCG ACCACCGACT GCGCGTGATC GGACGGATCA AGCCGGGCGT CACGATCGAC
CGGGTGCGCA CGGAGTTCAA CGCGATCACC GATCGACTGC GGCCGCTTTA TCCCTCGTGG
AAAAAACACT GGGGAACCCT CGTCGTGCCG TTGCACGAAC AGAGCGTCGA AGCGGTGCGG
TTGCAGCTCT GGGTGCTTTT TGGGGCCGTG GGGTTTGTGC TGCTGATCGC CTGCGCCAAC
GTCGCGGGTT TGCTCCTGGC ACGGATGTCT TCGCGTCGCC GCGAGGTGGC GCTGCGCGTG
GCGCTAGGTG CCGGCCGCGG TCGGGTACTC CGACAGTTGC TGACCGAAAG CGTGCTGCTT
TCCGCCCTCG GTGGCGGAGC GGGACTGCTC GTGTCCTTCT GGGCCACGGC CTCGCTCACC
CGACTTGGGC AGAACGCTCT GGGCCCCTCG CTGGAACTCG GCCTCGACAT CTGGACGCTC
GGCTTCGCGA CCGGCGTATC CGTTGCCACT GGCATTCTGT TTGGACTGGC GCCGGCGCTG
CACCTCGCTG ATGCAGGCAT GAGTCAAGGG CTGAAACTGG ATGGAAACGT AGCGGGAGGC
CGGCGACAGA GCCGATTGCG GCGCGGGCTG ATCGTGGCGG AGGTCGCACT CGCGCTCACG
TTGCTGGTAG GAGCCAGTCT GCTCATGACG ACGCTGTGGC GGCTGCACAA GGTGCCCCCG
GGATTCGAGC CACACGGAGT TCTGGCGATG GATATTTCCA TCGACCCCCG GAAGTTCGCC
GACACGGACC GCCGCACCCG ATTCGTACGG CAGATACTCG AACGACTCGA GTCGCTGGCC
GAAGTCGAAG CCGTGGCCGC AAGCACGTCC GTCCCGATGA GCGGCTTCTC GGACACGGCG
CTGCGGGCCG AGTACCAACC CGAACGGGAC GAGGTCTACG TTCACACCGA CCGCAGTTTT
GCCTCACCGG GATTCTTTCG CGCGCTCCGC ATTCCGCTCC TGCAAGGCCG GGAATTCACC
CCGCGTGATG AAGCCAAAGA TGCTCCGCCC GTCGTGATCC TGAGCGCGTC GCTGGCACGG
AAAGTCTTCC CCGATCGGGA CCCAATCGGT CAGGCCGTGC GCATGCAGGG CGAGCATTTC
GAGGTCGTGG GCGTCGTGGG CGATGTGCGC CAGCGCGGGC TCGACCATCC GATGAGCGAA
TATGTGTATC AGCCGGACGC CTCGGCTTGG GGCGCGTGCA CCCTGCTGGT GCGAACGGCG
GTTCCGCCGC TCGCAGCGGC CGAGACCTGC CGGCGCGTGA TCCTGCAGGT GGATGCCGAC
CAGCCGGTGG CCAACATCCG CACGCTGGAA AGCGTCATCA CGACGCGGGA CGCACCGCGC
CGGTTGATGC TCATACTGCT GTCCGTCTTC GCCGGCACCG CCGTGCTGCT GGTCGCGGTC
GGACTCTACG GACTCATCGC CTTCGGCGTC GTGCAACGCA CGCGCGAGAT CGGGATCCGC
ATGGCATTGG GCGCAGGTCG CCGGCATGTG CTTTCCGGCG TGATGCGCGA AGGGCTCGTC
CTCGCGATCG TCGGCGTCGT CTGCGGTCTC GCCGCCGCCT GCGGGTTGTC GCAGCTACTG
GTCGGTCTGC TGTTCCGCGT CACCCCGACC GATCCGTTCG TGCTCGGCGG GGTCGCCTTG
CTACTCCTCC TCATTGCGGC GTTCGCGTGC TGGCTGCCCG CAAGGCGCGC GGCAACCATC
AATCCGATCG AGGCGTTGAG ATGCGAGTGA
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| Protein sequence | MNLFDRFVAL FRPGRLDREM TAEIAEHLER ETQQNLARGM PSDEARFAAL RAFGGVEQIK
ERERDARGFF WLEQLAQDLR YALRMLRRDS GFTATVVLTL ALGIGGCTAV FSLVNHILLR
ALPYDEPQNL VHLWEDASGK GTGRNIVAGG QFGDWRAQAT TLESIAAIRR ESMNLTGLGE
PERLAITKVS ASYLRTLRVR PALGRDFQPD EDQPGKGNVA ILSHRLWQQS FASDPQVVGR
EILLDSESYT VVGVLASDPP LPYEGDVLLP FVFGTQPWHH VRGDHRLRVI GRIKPGVTID
RVRTEFNAIT DRLRPLYPSW KKHWGTLVVP LHEQSVEAVR LQLWVLFGAV GFVLLIACAN
VAGLLLARMS SRRREVALRV ALGAGRGRVL RQLLTESVLL SALGGGAGLL VSFWATASLT
RLGQNALGPS LELGLDIWTL GFATGVSVAT GILFGLAPAL HLADAGMSQG LKLDGNVAGG
RRQSRLRRGL IVAEVALALT LLVGASLLMT TLWRLHKVPP GFEPHGVLAM DISIDPRKFA
DTDRRTRFVR QILERLESLA EVEAVAASTS VPMSGFSDTA LRAEYQPERD EVYVHTDRSF
ASPGFFRALR IPLLQGREFT PRDEAKDAPP VVILSASLAR KVFPDRDPIG QAVRMQGEHF
EVVGVVGDVR QRGLDHPMSE YVYQPDASAW GACTLLVRTA VPPLAAAETC RRVILQVDAD
QPVANIRTLE SVITTRDAPR RLMLILLSVF AGTAVLLVAV GLYGLIAFGV VQRTREIGIR
MALGAGRRHV LSGVMREGLV LAIVGVVCGL AAACGLSQLL VGLLFRVTPT DPFVLGGVAL
LLLLIAAFAC WLPARRAATI NPIEALRCE
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