| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1827 |
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| Symbol | |
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| ID | 6206926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2272804 |
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| End bp | 2275221 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691475 |
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| Product | permease |
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| Protein accession | YP_001818710 |
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| Protein GI | 182413644 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.360396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.426274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCATC TGCGCTTCGC CTTCCGCCGA CTCGCGCGCG CTCGCGGGTT CACCGTTATC
GCCGTCCTCA CCCTCGCACT CGGGATCGGC GCGAGCACTG CGATTTTCTC GATCGTCAAC
GGCGTGCTGC TGCAGCCGCT GCCGTTCCCG GAGCAGGGTC AGCTCGTCTG GTTGCGGGAG
TCGATGCCGG TGTTCGGCTC CGAACCCCTG CCGGTCAACG CCTATCATTT CCGCACGTGG
CAGGAGCGGG CGCAGTCGTT CAGCCACCTC ACCGTCGTTG ACGGCCGCAC GGCAAGCATT
TCCAGCACCG ACCGCCCGGA GCTGGTTGGC CTGATCAGCG TGTCCGCCGG TTTTTTCGAG
GTGCTCGGCG TGCCGCCCGT GCTCGGGCGC ACCTTCGTCC CGGAGGAGGA AAACGCGGGC
CGCAACCACG TCGTGGTGAT CAGCGACGCG CTCTGGCAGC GCGCCTTCGG GCGCGACCCC
GCCGTCATCG GCCGCACGCT CGCTCTCGAT CGCGAGCCGC ACACCATCAT TGGCGTTTTG
CCGGCGAGCT TCCGCTTTCC CTCCGCGCGG GCCCAGATCG GCAGCGGAGC TCCGGCGCAT
CCCGACGTTT TCTGTCCCAA GGTCTTCGCC GCTGACGAAC TCCAGGAACG GCTGGGGCGA
CACAACTACG GCGCGATCGG TCGCCTGAAA GCTGGCGTGA GCCCCGTGCT GGCCGAAGCC
GAGTTGAACA GAATCGCGGG TCAGATCACA GCGGAAGCCG GCAAGCCGGA CATCGTGCTG
CGCGCCGTGG CGACGCCGCT GCATGAAGCA GTCGTGGGCC GTTCACGCCG CGGACTGATG
GTGCTGTTCG CCGCGGTCAC CTCGGTGCTG CTCATCGGCT GCGTAAACCT GATGAATTTC
CTGCTCGCCC AGGCCGAACG CCGGCAGCAG GAGTCGGCCG TGCGCCAGGC GCTCGGCGCC
AGCCGCAGTC GGCTGGTGTG CGCCGCGCTG ACCGAGGCGA TGCTCGTCGC GCTCGCCGGC
GGCGCACTGG GCGTGCTGCT CGCGCGAGTC GGGCTGGCGT CGCTCCTGCG CTTCGCCCCG
GCCGATCTGC CACGGGCGGG TGACATCTCG ATCGACGCCG GGGTGCTCGG GTTTGCGCTG
GCCTGCACGC TCGCCACCGG ACTTCTCTTT GGCTTCCTGC CGGCGTGGCG GCTCGCGCGC
AGCGATCCCC AGCAAGCACT CAGCGCCGGC AGCCGCGCGC TTGCGTCAGG CCGTCAGTCG
CGCCGCTGGA GCGACCTGCT CGTCACCACC GAGGTCGCGC TCAGCGTGGT GCTGCTTGCA
CTGGCGGCGT TGCTCGGCGG AAGTTTTGTC CGACTGCTGC GTGCCGAACA GGGATTCCGC
GCGCCGACCG TGATCAGCGC CAGCCTCGCG ATTCCTTACG CGGGTTATCC GGAGCCGGAA
GCACGGTCCG CCTACTTCGA GCGGATCGTC GCGCAACTGA ACGCAGCCCC CGGCATCACC
GCCGCCGCCG TGACGAACCT GCTTCCCCTC GCGGGCGAAA CGTGGGTCGA CAAGGCGGCC
GCGGCCGGCG ATCCCCGCCC GTCTGAGGAG AAACCCAACG TCAATACGCG ATTCGTCAGC
TCCGGATATT TTGAAGCAAT GGGCCTGCCG CTGCGCGCCG GGCGCAGTTT CGATGCCCGG
GATCGTGGCC GAAAGGTGAC CATCATTTCC GAGCAGCTCG CGCGCTTGCT CTGGCCGGAT
CAAGACCCGG TCGGTCGGCA CGTGGAGCGC AACCCCGGCG AAGAGTATGA GGTGATCGGA
GTTGCCGCTG ACGTCCGCCC CTCGGCGAAT CGGTCGCCCG TGCCCACCGT TTACCGCCAG
CAGCGCGACT GGCCGTTTCT GCGGATGACG GTCGTGGCTC GCGCCAGTGG CGACGCCCAG
TCCGCTGCGG CCGCACTGCG CGCCGCGATC GCGTCGGTCG ACCCGCAGGT GCCCGTGCCG
CCCTTTCGCA CGATGGACGA TGTGCTCGAC GCGTCGGTGG CCACGCAGCG TTTCCAACTG
CTGCTCGTCG CCGTCTTCGC CACCACGGCG CTGCTGCTGA CCATGCTCGG GATCTACGGT
GTGGTTGCGT ATGCGATCGC CCGCCGCCGC AAGGAACTCG GTATCCGGAT GGCGCTCGGC
GCCACGCCCG GGAGCATCCG GACGCTCGTG CTTCGGCATG GCATGCGACC GGTGGCCTTT
GGGCTCGGCG TCGGCTTGGT GCTGACACTC GCCGGCGGAC GCGTGCTCGA GAGCCTGCTG
TTCGAGACCC GACCGAGCGA CCCGGCCTTG CTCGCCGCCG TCGCCGGTGG GCTCGTGTTG
TGCGCACTGC TGGCGTGCTA CGTACCCGGC CGGCAAGCCA CGCGCGTCGA TCCGTTCGAC
GCGCTGCGTG CCGAGTAG
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| Protein sequence | MSHLRFAFRR LARARGFTVI AVLTLALGIG ASTAIFSIVN GVLLQPLPFP EQGQLVWLRE
SMPVFGSEPL PVNAYHFRTW QERAQSFSHL TVVDGRTASI SSTDRPELVG LISVSAGFFE
VLGVPPVLGR TFVPEEENAG RNHVVVISDA LWQRAFGRDP AVIGRTLALD REPHTIIGVL
PASFRFPSAR AQIGSGAPAH PDVFCPKVFA ADELQERLGR HNYGAIGRLK AGVSPVLAEA
ELNRIAGQIT AEAGKPDIVL RAVATPLHEA VVGRSRRGLM VLFAAVTSVL LIGCVNLMNF
LLAQAERRQQ ESAVRQALGA SRSRLVCAAL TEAMLVALAG GALGVLLARV GLASLLRFAP
ADLPRAGDIS IDAGVLGFAL ACTLATGLLF GFLPAWRLAR SDPQQALSAG SRALASGRQS
RRWSDLLVTT EVALSVVLLA LAALLGGSFV RLLRAEQGFR APTVISASLA IPYAGYPEPE
ARSAYFERIV AQLNAAPGIT AAAVTNLLPL AGETWVDKAA AAGDPRPSEE KPNVNTRFVS
SGYFEAMGLP LRAGRSFDAR DRGRKVTIIS EQLARLLWPD QDPVGRHVER NPGEEYEVIG
VAADVRPSAN RSPVPTVYRQ QRDWPFLRMT VVARASGDAQ SAAAALRAAI ASVDPQVPVP
PFRTMDDVLD ASVATQRFQL LLVAVFATTA LLLTMLGIYG VVAYAIARRR KELGIRMALG
ATPGSIRTLV LRHGMRPVAF GLGVGLVLTL AGGRVLESLL FETRPSDPAL LAAVAGGLVL
CALLACYVPG RQATRVDPFD ALRAE
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