Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1774 |
Symbol | |
ID | 6208795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2195423 |
End bp | 2196874 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641691423 |
Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
Protein accession | YP_001818658 |
Protein GI | 182413592 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.78082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCTCGTG CTTCCAACTC GCTCCGCGAC ACCGCCATTC CGCTGGCTTT GCTGACTGGT GATGCGTCAG TAACGTTCGC CGGCCTGGTA GGTGGCTGGT GGTTGCGCTA CGAGTCTCCG CTCGGACGGC TCGGCATCGA CGTGCCCGGG GCTGCGTTGT CCCCCTACCT GCCCCTGTTA TTCGTGGGCG TGGCATTGCT GGTCGGTGCC TTCGCTCAGC TCGGGCTGTA CGATAGCCGC ATGGTGCTAC GGCGCTATCA AAGCCTGAAC GCGATTATCA AAGGAACCGC ATTCTGGCTG GTCACGTATC TCGGCGTTTC ACTGGTGCTC AAATTCGATC CGCCGATCTC GCGCTTGTTC GTGGTGTTCG CTTTCGTCTG CGTCGTGCTG CTGCTCCATG TGTGGCGCAC CTTTGCCTAT GCGGTGATCA CGCAAACGCC GCTGCTGGGG CGACTGCGAC GCCGCACCGT GCTGCTGGGC TGGAACGACG ACGCGCGCGC GCTCGCTGCC GAAGTCCAGC GAGATCCCGC TCATCCGCTG ATCCTCGTCG GCGTGGTGGC GCTGCCCGAC GAGAGCCCAA CTGCGGATCC GGGAGCGGGT GGCGATTTCC CGTTCATGCT GCCGCGGCTC GGCAGCATTG CGGAGCTCGA ATCAATCCTC GCACGCACGT TTGCGGACGT TTTGATCGCC ACGCGGCTCG AAATACCGCG CGAGGAGGCA CGGCGCATCG TGGAGATCTG CGAGCGCCGA TACGTGGAGT GGAAGGTGGT GCCTGGTGCC TTCGACATCT TTCTTAGCGG GCTGCGGCTG CAAACGATCG GCCGGGTGCC GGTGCTCGGC GTCGAGGAAC TGGCGATCAA CCGGCTGCTT TCGCGTGCGT TGAAGCGCGC GAGTGATCTG GTGGGTGGAG TGATCGGGCT GCTCGGCTCG GCGCCCTTGA TGCTTGTGCT GGCCATGCTG ATCAAGCGCC AGTCACCTGG CGGCCCAGTC TTATTCCGCC AGCAACGCAT CGGCGCGGAT CACCAGCCAT TCACGCTTTA CAAGCTGCGA AGCATGCAGC CTGACGCCGA CGCCTCCGAC TCGGCGCACC AGAGCACCGG GCCGCACGAT CCGCGACTGC TTCCGATCGG CGCCTTCCTG CGGCGTTGGA ATCTCGATGA ATTGCCGCAG TTTTGGAACG TTCTCCGTGG CGACATGAGT CTTGTCGGCC CGCGGCCCGA GCGCCCCTAC CACGTCGACC AGCTCGCCCG CACGATCTCG CATTACCTGC CGCGTCACCT GGTAAAACCA GGCATGACCG GTTGGGCGCA GGTCAACGGG CTGCGGGGCG ACACCGATCT CGCGGCGCGC GTGCAGCACG ACATCTACTA CATCGAGAAT TGGAGTCTCT GGCTGGACGT GCAAATCTTG CTTCTGACGC TGATACGCTG GCGGAGCCCC GATGGTTCCT AA
|
Protein sequence | MPRASNSLRD TAIPLALLTG DASVTFAGLV GGWWLRYESP LGRLGIDVPG AALSPYLPLL FVGVALLVGA FAQLGLYDSR MVLRRYQSLN AIIKGTAFWL VTYLGVSLVL KFDPPISRLF VVFAFVCVVL LLHVWRTFAY AVITQTPLLG RLRRRTVLLG WNDDARALAA EVQRDPAHPL ILVGVVALPD ESPTADPGAG GDFPFMLPRL GSIAELESIL ARTFADVLIA TRLEIPREEA RRIVEICERR YVEWKVVPGA FDIFLSGLRL QTIGRVPVLG VEELAINRLL SRALKRASDL VGGVIGLLGS APLMLVLAML IKRQSPGGPV LFRQQRIGAD HQPFTLYKLR SMQPDADASD SAHQSTGPHD PRLLPIGAFL RRWNLDELPQ FWNVLRGDMS LVGPRPERPY HVDQLARTIS HYLPRHLVKP GMTGWAQVNG LRGDTDLAAR VQHDIYYIEN WSLWLDVQIL LLTLIRWRSP DGS
|
| |