Gene Oter_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1774 
Symbol 
ID6208795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2195423 
End bp2196874 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content64% 
IMG OID641691423 
Productexopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 
Protein accessionYP_001818658 
Protein GI182413592 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.78082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCGTG CTTCCAACTC GCTCCGCGAC ACCGCCATTC CGCTGGCTTT GCTGACTGGT 
GATGCGTCAG TAACGTTCGC CGGCCTGGTA GGTGGCTGGT GGTTGCGCTA CGAGTCTCCG
CTCGGACGGC TCGGCATCGA CGTGCCCGGG GCTGCGTTGT CCCCCTACCT GCCCCTGTTA
TTCGTGGGCG TGGCATTGCT GGTCGGTGCC TTCGCTCAGC TCGGGCTGTA CGATAGCCGC
ATGGTGCTAC GGCGCTATCA AAGCCTGAAC GCGATTATCA AAGGAACCGC ATTCTGGCTG
GTCACGTATC TCGGCGTTTC ACTGGTGCTC AAATTCGATC CGCCGATCTC GCGCTTGTTC
GTGGTGTTCG CTTTCGTCTG CGTCGTGCTG CTGCTCCATG TGTGGCGCAC CTTTGCCTAT
GCGGTGATCA CGCAAACGCC GCTGCTGGGG CGACTGCGAC GCCGCACCGT GCTGCTGGGC
TGGAACGACG ACGCGCGCGC GCTCGCTGCC GAAGTCCAGC GAGATCCCGC TCATCCGCTG
ATCCTCGTCG GCGTGGTGGC GCTGCCCGAC GAGAGCCCAA CTGCGGATCC GGGAGCGGGT
GGCGATTTCC CGTTCATGCT GCCGCGGCTC GGCAGCATTG CGGAGCTCGA ATCAATCCTC
GCACGCACGT TTGCGGACGT TTTGATCGCC ACGCGGCTCG AAATACCGCG CGAGGAGGCA
CGGCGCATCG TGGAGATCTG CGAGCGCCGA TACGTGGAGT GGAAGGTGGT GCCTGGTGCC
TTCGACATCT TTCTTAGCGG GCTGCGGCTG CAAACGATCG GCCGGGTGCC GGTGCTCGGC
GTCGAGGAAC TGGCGATCAA CCGGCTGCTT TCGCGTGCGT TGAAGCGCGC GAGTGATCTG
GTGGGTGGAG TGATCGGGCT GCTCGGCTCG GCGCCCTTGA TGCTTGTGCT GGCCATGCTG
ATCAAGCGCC AGTCACCTGG CGGCCCAGTC TTATTCCGCC AGCAACGCAT CGGCGCGGAT
CACCAGCCAT TCACGCTTTA CAAGCTGCGA AGCATGCAGC CTGACGCCGA CGCCTCCGAC
TCGGCGCACC AGAGCACCGG GCCGCACGAT CCGCGACTGC TTCCGATCGG CGCCTTCCTG
CGGCGTTGGA ATCTCGATGA ATTGCCGCAG TTTTGGAACG TTCTCCGTGG CGACATGAGT
CTTGTCGGCC CGCGGCCCGA GCGCCCCTAC CACGTCGACC AGCTCGCCCG CACGATCTCG
CATTACCTGC CGCGTCACCT GGTAAAACCA GGCATGACCG GTTGGGCGCA GGTCAACGGG
CTGCGGGGCG ACACCGATCT CGCGGCGCGC GTGCAGCACG ACATCTACTA CATCGAGAAT
TGGAGTCTCT GGCTGGACGT GCAAATCTTG CTTCTGACGC TGATACGCTG GCGGAGCCCC
GATGGTTCCT AA
 
Protein sequence
MPRASNSLRD TAIPLALLTG DASVTFAGLV GGWWLRYESP LGRLGIDVPG AALSPYLPLL 
FVGVALLVGA FAQLGLYDSR MVLRRYQSLN AIIKGTAFWL VTYLGVSLVL KFDPPISRLF
VVFAFVCVVL LLHVWRTFAY AVITQTPLLG RLRRRTVLLG WNDDARALAA EVQRDPAHPL
ILVGVVALPD ESPTADPGAG GDFPFMLPRL GSIAELESIL ARTFADVLIA TRLEIPREEA
RRIVEICERR YVEWKVVPGA FDIFLSGLRL QTIGRVPVLG VEELAINRLL SRALKRASDL
VGGVIGLLGS APLMLVLAML IKRQSPGGPV LFRQQRIGAD HQPFTLYKLR SMQPDADASD
SAHQSTGPHD PRLLPIGAFL RRWNLDELPQ FWNVLRGDMS LVGPRPERPY HVDQLARTIS
HYLPRHLVKP GMTGWAQVNG LRGDTDLAAR VQHDIYYIEN WSLWLDVQIL LLTLIRWRSP
DGS