| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1681 |
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| Symbol | |
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| ID | 6206267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2064521 |
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| End bp | 2066980 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691328 |
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| Product | permease |
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| Protein accession | YP_001818565 |
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| Protein GI | 182413499 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.715398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCG GCACAGGCGG TCGCGGCCCG GGGGCGCTAA TCTGGTGGCG CATGACCACC
CTGCTCGCCG AGATTCACGA GGCCCTGCGC CAGCTGCGAC GCGCGCCCGG GTTTTCCCTC
GTCGCCGTAG GCCTGCTCGC CCTTGGCCTG GGCACGACCA CCGCCATCTG CTCGCTCGCG
TATGCGATCG TGCTCCGGCC GCTACCTTTT CGTGATCCGC AGGGGCTGGT GGGCTTTCGC
GCGATCAACT CGGTCAAGGC GATCACGCAG GATGGCCACT CCGCGTCCGA CTTCCTCGAT
TACGCGCAAC GCGCCCAAAG CTTCTCGGGG TTGATGGCGT ACCGGCCGAA TTTCGCCGCC
TACACCCGGC CTGGCGAACC GGCGGTTCGG CTGGTCACGG CACTCGTGAC GGAAAATTTC
TTCCCGGTCC TCGGCGTGGC GCCGGTGGGA GGCCGCACGT TTTCAGCCGA CGAGTTCAGC
GTCAGCGCGC CACGCGCCGT CGTACTGAGC AATGTCGCGT GGCGCCGGCT CTTCGGGGCA
CAGCCGAATG CCGTCGGCCG CACCATCCTG CTCGACGACC AGCCGCACAC GATCGTCGGC
ATCATGCCGG AATCGTTTCG TGAACCGGAG TTCGTCGATG CGTGGCTTCC TTTTCCGAAG
GAAGCACCCG AGTATTTCGC CCGCGACTCA CGGTTCTGGA ACATCGTCGG CCGGCTCAAG
CCCGGAGTCA CTGCCCCGAC CGCGCACGCC GAGTTGCAGG GCATCGCCGC CGATCTCGCG
CGCCAGTTTC CCGAGACGAA TCGCGATTGG AGCACCCGCG TGCAGCCGCT CCACGAGCTC
CGCACGCGGG GCATGCGCAC CACCCTGCTG CTACTCACCG GCGCGGTTGC CCTCGTGCTC
GCCATCGCCT GTCTCAATCT CGCAAACCTC CTGCTCGCGC GCGGGCTGTC GCGGCTGCAG
GACCTTGCGG TGCGGCTCGC GCTCGGCGCC ACGCCGCAGC AACTCGCGCG GCGAATCCTG
ATCGAGAGCT CGCTGCTGGC GCTGCTCGGC GGCGCGGTGG GTTGCGCGCT GGCGGCGGGC
GCGCTGCCGG TGCTCGTCAC GCGATTGCCG GCGGGACTCA TCCCGCGTTC ACAGGAAGTC
GCACTCCATC CGCCCGTGCT GCTGGCCGCG TTGGCGATCG CGCTCATCAC GGGCGTGCTC
TTCGGATTGT TGCCCGCGCT GCAGGTACTG CGCACCGACG TGAACACGCT GCTGAAGCAC
GGCGGCACGC GCGGCGCGAG CAATGCCGCC GCGGCGCGCG TGCAGGGACT GCTGGTGACC
GGGCAGGTCG CCCTCTCGTT CGTCGTACTC GCCGCCTCGC TGTTGCTGAT GAAAAGCCTG
CTGCAGCTGC AGAACTCGAA TCCGGGCTTC GATCCCACGC ACGTACTTAC GTTGCAGCTC
GCGCCGCCAC CCACGCGGTT CGAAACCAAT CTCGAACTCG CGCAATATTA CGAACGGCTC
GTGACCGAGG CGGCGGCGGT GCCCGGCGTC GCCTCCGCCG CGGTGAACGC CAGCGCCCCG
CTGTGCGGCA TTACGCTGCA ATATCCGTTC TGGATCGAGG GCCGGCCGCG CAGCGACGTC
GGCGCCGACG AAGCGGTCTA CGCACCGGTC ACCGAGGATT TCTTTGCCAC GATCAAACTG
CCGCTGAAGC AAGGCCGCAC GTTCAACCCG CACGACAACG AGCGCGGCGC GCCGGTCGCG
ATCATCAATG AAACCCTTGC GCGACGGATC TTCCCCGGCG AAAACCCAAT CGGCCGCCGC
GTGCTCCTGC TCCCGTGGCT CTCCGACCAG TATCGGGAGA TCGTCGGCGT CGTCGGTGAC
ACGCGGCAGG ACAATCTTTC GTCACCCACG CCCGCCCAGA TCTACGTGCC GCAGCGCCAA
ATGCCGTGGT TCTTCTCCAC GCTGCTGGTG CGGCTCAACC GCCCCGATGC CGCGCGGGCA
GTGCAGGCCG CGATGCAGCG CGTGGATCCC ACGCTGCCGT TTTCGCCGAC CACGCTCGAG
GGCAACATTG CTCTCACGAC GACGCAGCCA CGGCTCTACG CCACCTTGTT CGGTATCTTC
GCCGTGGTCG CGCTGGGGCT TTCGGCCTTC GGCATCTACG CCAGCATGAG TTTCACCACC
CGTCGGCGCA CGCGGGAGAT CGGCATCCGG ATGGCGCTGG GTTCCACTCC GTCCCAGGTG
CTGCAGCACG TGCTCGCGCA GGCCGGCCGG CTCGCCGCGG TCGGGCTCGC GATCGGCTTG
ATGCTCGCGG CGATCGTGGC GAATTCGCTG CGGGGCCTGC TCTACGGCGT GCAGCCCGGC
GATCCGTGGA TCTACGCCGC GCTTTGCGTC TTCCTCCCGC TCGTGGCGCT GGCCGCCGCC
ATGCCCAGCG CCCTCCGCGC CGCGCGACTG CCGCCGACCT GCGCGCTCCA AGACGATTGA
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| Protein sequence | MTSGTGGRGP GALIWWRMTT LLAEIHEALR QLRRAPGFSL VAVGLLALGL GTTTAICSLA
YAIVLRPLPF RDPQGLVGFR AINSVKAITQ DGHSASDFLD YAQRAQSFSG LMAYRPNFAA
YTRPGEPAVR LVTALVTENF FPVLGVAPVG GRTFSADEFS VSAPRAVVLS NVAWRRLFGA
QPNAVGRTIL LDDQPHTIVG IMPESFREPE FVDAWLPFPK EAPEYFARDS RFWNIVGRLK
PGVTAPTAHA ELQGIAADLA RQFPETNRDW STRVQPLHEL RTRGMRTTLL LLTGAVALVL
AIACLNLANL LLARGLSRLQ DLAVRLALGA TPQQLARRIL IESSLLALLG GAVGCALAAG
ALPVLVTRLP AGLIPRSQEV ALHPPVLLAA LAIALITGVL FGLLPALQVL RTDVNTLLKH
GGTRGASNAA AARVQGLLVT GQVALSFVVL AASLLLMKSL LQLQNSNPGF DPTHVLTLQL
APPPTRFETN LELAQYYERL VTEAAAVPGV ASAAVNASAP LCGITLQYPF WIEGRPRSDV
GADEAVYAPV TEDFFATIKL PLKQGRTFNP HDNERGAPVA IINETLARRI FPGENPIGRR
VLLLPWLSDQ YREIVGVVGD TRQDNLSSPT PAQIYVPQRQ MPWFFSTLLV RLNRPDAARA
VQAAMQRVDP TLPFSPTTLE GNIALTTTQP RLYATLFGIF AVVALGLSAF GIYASMSFTT
RRRTREIGIR MALGSTPSQV LQHVLAQAGR LAAVGLAIGL MLAAIVANSL RGLLYGVQPG
DPWIYAALCV FLPLVALAAA MPSALRAARL PPTCALQDD
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