| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1593 |
|---|
| Symbol | |
|---|
| ID | 6208839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1965796 |
|---|
| End bp | 1966404 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641691234 |
|---|
| Product | beta-phosphoglucomutase family hydrolase |
|---|
| Protein accession | YP_001818477 |
|---|
| Protein GI | 182413411 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02009] beta-phosphoglucomutase family hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.113259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG AAATCCCGCC CGGCGATTTC GCCGGCTACA TTTTCGATTT GGATGGCACG
CTCATCGACA CCATGCCGCT GCACTATCGG GCTTGGGACG AGGCGATGCG ACGCGCTGGA
TTAACGGTGG CGCTGGACGA GGACTTGTTT TACTCGCTCG GCGGGGTGCC GACGCGGCGG
GTGGCCGAGC TGATTGCGGC GCATTACGGG CTGAAGATCG ACGCGCAGCG CGTGTTTCAC
GAAAAAGAAT CGCTGTTCAC CGAGCTGCAA AAGGACGCGC AGCTGATTGC GCCCACGGTG
GAGTTTGCAC GCAAGGCCGC CGCCACGCAC CCGATGGCGA TCGCGTCCGG TGGGCCGCGC
GACATCGTGC GGCGCTCATT GGAGCTCGCG GGCTTGGCGC CCTTGTTCAA GGCCGTCGTC
ACGGCAGACG ACGTGGTCCA CGGCAAACCG GCGCCGGACA TGTTCCTGCT CGCGGCCAAA
CTGATCGGCG TGGCACCGGA AAGATGCCTG GTATTCGAGG ATGCCGAGCC GGGCTTCAAG
GCGGCGGCGG CCGCGGGCAT GCGCGTGGTG CGCGTGCCCA GCCGGATTCG GTGTACGAAA
CGCAGCTGA
|
|---|
| Protein sequence | MKLEIPPGDF AGYIFDLDGT LIDTMPLHYR AWDEAMRRAG LTVALDEDLF YSLGGVPTRR
VAELIAAHYG LKIDAQRVFH EKESLFTELQ KDAQLIAPTV EFARKAAATH PMAIASGGPR
DIVRRSLELA GLAPLFKAVV TADDVVHGKP APDMFLLAAK LIGVAPERCL VFEDAEPGFK
AAAAAGMRVV RVPSRIRCTK RS
|
|---|
| |