Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1593 |
Symbol | |
ID | 6208839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1965796 |
End bp | 1966404 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691234 |
Product | beta-phosphoglucomutase family hydrolase |
Protein accession | YP_001818477 |
Protein GI | 182413411 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E [TIGR02009] beta-phosphoglucomutase family hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.113259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGG AAATCCCGCC CGGCGATTTC GCCGGCTACA TTTTCGATTT GGATGGCACG CTCATCGACA CCATGCCGCT GCACTATCGG GCTTGGGACG AGGCGATGCG ACGCGCTGGA TTAACGGTGG CGCTGGACGA GGACTTGTTT TACTCGCTCG GCGGGGTGCC GACGCGGCGG GTGGCCGAGC TGATTGCGGC GCATTACGGG CTGAAGATCG ACGCGCAGCG CGTGTTTCAC GAAAAAGAAT CGCTGTTCAC CGAGCTGCAA AAGGACGCGC AGCTGATTGC GCCCACGGTG GAGTTTGCAC GCAAGGCCGC CGCCACGCAC CCGATGGCGA TCGCGTCCGG TGGGCCGCGC GACATCGTGC GGCGCTCATT GGAGCTCGCG GGCTTGGCGC CCTTGTTCAA GGCCGTCGTC ACGGCAGACG ACGTGGTCCA CGGCAAACCG GCGCCGGACA TGTTCCTGCT CGCGGCCAAA CTGATCGGCG TGGCACCGGA AAGATGCCTG GTATTCGAGG ATGCCGAGCC GGGCTTCAAG GCGGCGGCGG CCGCGGGCAT GCGCGTGGTG CGCGTGCCCA GCCGGATTCG GTGTACGAAA CGCAGCTGA
|
Protein sequence | MKLEIPPGDF AGYIFDLDGT LIDTMPLHYR AWDEAMRRAG LTVALDEDLF YSLGGVPTRR VAELIAAHYG LKIDAQRVFH EKESLFTELQ KDAQLIAPTV EFARKAAATH PMAIASGGPR DIVRRSLELA GLAPLFKAVV TADDVVHGKP APDMFLLAAK LIGVAPERCL VFEDAEPGFK AAAAAGMRVV RVPSRIRCTK RS
|
| |