| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1566 |
|---|
| Symbol | |
|---|
| ID | 6208174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1943461 |
|---|
| End bp | 1943946 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641691207 |
|---|
| Product | putative 6-pyruvoyl tetrahydropterin synthase |
|---|
| Protein accession | YP_001818450 |
|---|
| Protein GI | 182413384 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
|---|
| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.380065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.288201 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCGA AGTCCCGCCG CCGCCGATCC GCCGCGCGCT CACCGCGCGT GCTGCGCGGC
ACCGTGTTCA TCACGCGGCA GGTGCACTTC AACGCGGCGC ACCGGCTCTA CAACCCGACC
AAGAGCCAGG CATGGAACAC GAACCAGTAT GGGCTTTGCA CCAGTCCCAA CTGGCACGGG
CACAACTACG TGCTCGAGGT CACTGTGCGC GGCGAGCCCG ACCCGGAGAC CGGCTACATC
GTCGACTTGT CCGAGCTGAA GCGCGTGCTG CACGAGACGG TCGTTGACCG CTGCGATCAC
CGGAACCTCA ACGACGACGT GGATTTTCTG CGCAACGTCA TTCCGACGAC CGAGAATCTG
GTGATCGCGT TTTGGGATCA GATCGAACCG GCGTTGCCCG CGGGGAAGCT GCATTGCGTG
CGGCTGTATG AGACGCCGCG GAATTTCGCC GAGTATTTCG GACCCGATGC GCCGGCGCGG
GCGTAA
|
|---|
| Protein sequence | MPAKSRRRRS AARSPRVLRG TVFITRQVHF NAAHRLYNPT KSQAWNTNQY GLCTSPNWHG
HNYVLEVTVR GEPDPETGYI VDLSELKRVL HETVVDRCDH RNLNDDVDFL RNVIPTTENL
VIAFWDQIEP ALPAGKLHCV RLYETPRNFA EYFGPDAPAR A
|
|---|
| |