Gene Oter_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1563 
Symbol 
ID6208170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1937779 
End bp1938582 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID641691204 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001818447 
Protein GI182413381 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.482426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGC GGTTCAGCAT TCTTGGCAGC GGCAGTTCCG GCAACGCCGC GCTCCTCGTC 
ACCGAGGGCG CGCGCGTGCT GGTCGACGCC GGGTTCTCCG CCCGCCGGCT CGGCACGCTG
CTGGCCGCCG TCGGTGAGTC GCTCGACCGG ATCGACGCCG TGTTCCTCAC GCACGAGCAC
GGCGACCACT CGGGCGGCAT CGAGGGCCTG AAAAAATTTC CGCACATCCA GATCTTCGCC
AACGCCGGCA CGGCCCGCGC GGTGCAGGCC GGGCTTTCCT ACCGGCCGAC CTGGCACCTG
TTCGAGACCG GCGCGCGTTT CCTGTTTCGC GATCTGGAGG TCACCACCTT CTCGGTGCCA
CACGATGCCC AGGAGCCGGT CGGGTTCCGG TTCACCTCCG GGCACGACGG CGATTTGTTT
TCGCCGCGAC GCTCGCTCAC GTTTTTGACC GACCTCGGGC ATGCGCCGCT GAACGTCCGC
GAACAGCTGC GCGACTGCTG CGTTGTCGTG ATCGAGGCGA ATCACTGCCC CGAGTTGCTC
AAAGCCGACA CGCGCCGGCC GTGGCCCACG AAGCAGCGGA TTAGCGGCCG GCATGGGCAT
CTCTCCAACG AAGCCGTGCG CGAACTCCTC ACCGAGATCG CCTGCCCGCA GTGGCGGCAC
GTTTACCTGA CGCACCTTTC GCGCGAGTGT AACTCCCGCG CCGCGGTCGA GCGGATGTTG
GCCACGCTGC GCCCCACGCT CACCGCCTGC GAGTTCTCGA TCGTCTGCCA AGGCGAGAGC
ACGCCGCTCT GCGACTGCGG GTGA
 
Protein sequence
MAMRFSILGS GSSGNAALLV TEGARVLVDA GFSARRLGTL LAAVGESLDR IDAVFLTHEH 
GDHSGGIEGL KKFPHIQIFA NAGTARAVQA GLSYRPTWHL FETGARFLFR DLEVTTFSVP
HDAQEPVGFR FTSGHDGDLF SPRRSLTFLT DLGHAPLNVR EQLRDCCVVV IEANHCPELL
KADTRRPWPT KQRISGRHGH LSNEAVRELL TEIACPQWRH VYLTHLSREC NSRAAVERML
ATLRPTLTAC EFSIVCQGES TPLCDCG