| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1552 |
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| Symbol | |
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| ID | 6205142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1923461 |
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| End bp | 1926790 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641691193 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001818436 |
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| Protein GI | 182413370 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.709055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGC GCATCATCGA GTTTTCGCTC GCCAACCGAT TCCTGGTGCT CGTCGCCACC
GCTGCGTTGA TCATCGGCGG CGTCTACGCG GTGCGGAACA TCCCGCTCGA TGCGATCCCA
GATCTGTCGG ACACCCAGGT CATCATCTAC ACGGAGTGGC CGGGCCAGGC GCCGCAAATC
GTCCAGGATC AGCTCACGTA TCCCATCACG ACGAAGATGC TTTCCGTGCC GTCGGCCAAG
GTCGTGCGCG GCTACTCGTT CTACGGATTC TCCTTCGTCT ATATCATCTT CGACGACGGC
ACCGACCCGT ATTGGGCGCG CAGCCGCGTC CTGGAATATC TCAGCGGGCT CTCGAATTCG
CTCCCGAAGG GGGTGTCGCC CACCCTCGGG CCCGACGCGA CCGGCGTCGG TTGGGCGTTC
ATGTATTCGA TCAACTCGCC GAAGCGCGAC CTGGCCGAGC TGCGCTCGAT GCAGGACTGG
TATTTGAAAT ACCAGCTCTC CAGCGTCGAT GGCGTCGCGG AGGTCGCGTC GGTCGGCGGC
TACGTCAAAC AATACCAGAT CACCGTCGAT CCGAACCGGC TGCGCGCCTA CGGGCTGTCG
CTGGGCGAGG TGGCCAGCGC CGTGCAGCGC AGCAATGGCG AGGTGGGCGG TCGCTCGCTC
GAGTTGGCGG AAAAGGAGTT CATCCTGCGG GTGAAGGGCT ATGTTACCGG ACTCGATGAT
CTCCGCCAGG TGGCGGTGGG CGTCGGCCCG GGCGGCACCC CGATCCTCCT TGGCGAGGTG
GCCAATGTGC AGCTCGGCCC CGACATGCGA CGCGGCATCG CCGAACTGAA CGGCGAGGGC
GAAACGGTCG GCGGCGTCGT CGTCGTCCGC TATGGCGTCG ACACCCGCGC GGTCATCGAG
GCCGTCAAGG CGCGGCTCGA CCAGGCGATG AAGGGCCTGC CCGACGACGT CAGCTACACC
GTCACCTACG ATCGCACCGC CCTGATCGAG CGTTCGGTCA AGACGCTCGA GCACACCCTG
CTCGAGGAAA GCATCGTCGT CGCCCTCGTC ATCATCGTGT TCCTGATGCA CCTGCGCACG
GCGTTGATCC CGATCCTCAT CCTGCCGATC TCCGTGCTGG CGTCGTTCAT GATCATGTAT
GGGCAGGGCA TCTCGTCCAA CATCATGTCG CTCGGCGGCA TCGCGATCGC GATTGGCGTG
CTCGTGGACG GCGTGATCAT CCTCGTCGAG AACACCCACA AGCACCTCGA GCGCGACGCC
GGCACGAAGC CACATTGGGA AATCGTGCGC GACGCCGCCG TGGAGGTCGG TCCCACCATT
TTCTACGCGC TGCTCGTGGT GACGGTTTCA TTCCTGCCGG TTTTCACCCT GCAGGAACAG
GAAGGCCGGC TCTTCAAGCC GCTCGCGTTC ACCAAGACCT ATTCGATGGC CGCGGCCGCG
CTGCTCGCGA TCACGCTGGC ACCCGTACTC GCCGGCTACT TCATCCGCGG CCGGCTGCGG
CCGGAGGAGA AAAACCCGGT CAGCCGCTTC CTCATCTGGC TCTACCACCC GGTGATCAAC
CGGGTGATCC GCTGGCGCTG GCCGGTGGTC ATCACCGCGG CCGTGCTCGT CCTGTGGGTG
TTCGTGCCGT GGAACCGCTG GGTCGTCGAA CCGCTGCCCT ACGGTCGCGT CAAGGAGTTC
GCCCGCAAGC TCAACCCGAT CTTCCCGTAT CAGAATCTCG GCTCCGAGTT CATGCCGCCG
CTCTACGAAG GCGACCTGCT CTACATGCCG ACGACGTTCC CCGGCCTCTC ACCGACGAAG
GCGCGCGAGC TGCTCCAGCA AACGGACCAG ATCATCAAAT CGTTCCCCGA GGTGCACCAC
GTCTTCGGCA AAATCGGCCG CGCGGAAACC GCCACCGACC CGGCACCGAT GGACATGATC
GAGACCACGA TCATGTTGAA GCCGGAGGCC GAATGGCCGG AGGTCGACAT TCTCGACATG
GAAGGGCGCG TCGTCGCGCA CCGGCGGCGC ACGCTCGACG AACTCACCGA CGCGCTCAAT
CGCGCCGTGC AGATCCCGGG GCTCACCAAT GCGTGGACGA TGCCGATCCG GACGCGCATC
GACATGCTGG CGACCGGCAT CAAGACCCCG GTCGGCATCA AGATCGCCGG AACCGATCTG
GCCGAGCTCG AGCGGATCGG CTCCGAGGTC GAGGCCGTGG TTCGCTTCGT GCCCGGCACG
AGCACGGCCA TCGCCGAACG CGTCCTCGGC GGAAATTACA TCGAGTTCGA CATCGATCGC
GCGGCCATCG CGCGCTACGG ATTGAACGTG CGCGACGTGC AGGACGTGCT CGAGGTCGCG
CTGGGCGGCA TGCCGCTCAC CACGACGGTC GAGGGCTTGG AGCGCTACGG CGTCATTCTC
CGCTACGACC GCGATTATCG CGACAACCTC GAGGCGCTCG GCGAAATCGC GATCCCGGTC
CGCTCCGGCG GGGCGATGGG CGCGAGTTCC GGCGGGATGG GCGATTCGGC CGCGGCGATG
GGAGCGGCGC TCGCACCGGC GAACAGCACC GCGGCGCCCG CCCAGATTCC GCTCAGCCAA
GTCGCGAAGC TCCGCGTCGT CGCCGCCCCG ATGGGCATCA AGAGCGAGGC GTCCGTCCCG
AACGCCTGGG TCTACGTCGA CGTGCACGGT GTCGACATCG GCACCTACGT CCAGAACGCA
CGGCGCGTCG TAGACGAAGC CGTCAAAGCC GGCACGATCC GGCTGCCGGA AGGCTACAAT
CTGTTTTGGA GCGGGCAGTA TGAATACATG ACCAGCGCCA AGGAGCGGCT GCTGCTCATC
GTCCCGATCA CGCTCTTCAT CGTCGGCATT CTGATCTACC TGAGCACACA CTCGCTGGTG
AAGACGGCGA TCGTCTTCCT GGCGGTGCCG TTCTCGCTCG TGGGCGCGTT CTGGTTGCTC
CATCTGCTCG ATTACAACCT CAGCGTGGCG GTGTGGATCG GACTGATCGC GCTAGCCGGC
CTCGATGCGG AAACCGGCGT GGTGATGCTA CTTTACCTGG ACATCGCCTA CGCGGACGGC
GTCCGCACCG GCCGAATGCG GCATTCGGAC GATCTGGTCG CCGCGATCCA CCATGGCGCG
GTGCAGCGCA TTCGGCCGAA GATGATGACG GCCGCCACGA CGTTCATCGG CTTGGTGCCC
ATCCTCTGGA GCACCGGCAC CGGGGCCGAC GTCATGAAGC GTATCGCGGC GCCGATGGTT
GGCGGCGTGA TCACGTCGGT GCTGATGGAG CTCCTGGTAT ATCCGGCGAT ATTCTACATG
TGGCGGCGTC GCAGCCTGCC GGCGCCCTAG
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| Protein sequence | MLKRIIEFSL ANRFLVLVAT AALIIGGVYA VRNIPLDAIP DLSDTQVIIY TEWPGQAPQI
VQDQLTYPIT TKMLSVPSAK VVRGYSFYGF SFVYIIFDDG TDPYWARSRV LEYLSGLSNS
LPKGVSPTLG PDATGVGWAF MYSINSPKRD LAELRSMQDW YLKYQLSSVD GVAEVASVGG
YVKQYQITVD PNRLRAYGLS LGEVASAVQR SNGEVGGRSL ELAEKEFILR VKGYVTGLDD
LRQVAVGVGP GGTPILLGEV ANVQLGPDMR RGIAELNGEG ETVGGVVVVR YGVDTRAVIE
AVKARLDQAM KGLPDDVSYT VTYDRTALIE RSVKTLEHTL LEESIVVALV IIVFLMHLRT
ALIPILILPI SVLASFMIMY GQGISSNIMS LGGIAIAIGV LVDGVIILVE NTHKHLERDA
GTKPHWEIVR DAAVEVGPTI FYALLVVTVS FLPVFTLQEQ EGRLFKPLAF TKTYSMAAAA
LLAITLAPVL AGYFIRGRLR PEEKNPVSRF LIWLYHPVIN RVIRWRWPVV ITAAVLVLWV
FVPWNRWVVE PLPYGRVKEF ARKLNPIFPY QNLGSEFMPP LYEGDLLYMP TTFPGLSPTK
ARELLQQTDQ IIKSFPEVHH VFGKIGRAET ATDPAPMDMI ETTIMLKPEA EWPEVDILDM
EGRVVAHRRR TLDELTDALN RAVQIPGLTN AWTMPIRTRI DMLATGIKTP VGIKIAGTDL
AELERIGSEV EAVVRFVPGT STAIAERVLG GNYIEFDIDR AAIARYGLNV RDVQDVLEVA
LGGMPLTTTV EGLERYGVIL RYDRDYRDNL EALGEIAIPV RSGGAMGASS GGMGDSAAAM
GAALAPANST AAPAQIPLSQ VAKLRVVAAP MGIKSEASVP NAWVYVDVHG VDIGTYVQNA
RRVVDEAVKA GTIRLPEGYN LFWSGQYEYM TSAKERLLLI VPITLFIVGI LIYLSTHSLV
KTAIVFLAVP FSLVGAFWLL HLLDYNLSVA VWIGLIALAG LDAETGVVML LYLDIAYADG
VRTGRMRHSD DLVAAIHHGA VQRIRPKMMT AATTFIGLVP ILWSTGTGAD VMKRIAAPMV
GGVITSVLME LLVYPAIFYM WRRRSLPAP
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