Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1520 |
Symbol | |
ID | 6205644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1884128 |
End bp | 1885921 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691161 |
Product | ABC transporter related |
Protein accession | YP_001818404 |
Protein GI | 182413338 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.887648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGCG CGGAACTTGG AAGAGTGCGC GACCTGTCGC GCATGCGCTC CGGCACGTTT CAACGATTTC TCGCTCTTAC TCGTCCGCAT CGCTGGCGGA TCGCGCTCGG CATCGTGCTG ATTCTGGCGG CGACCGCGCT GACACTGCCG GCGCCGTGGA TCTTCAAGCT GATCATCGAC GAGGCGCTGC CGCAGCGGGA CTTGTCGCAG CTCGGCTGGC TGCTGGTCGT GTTCACCGCG CTGTTTCTGC TGCGCGGCTG GCTCACGCTG GTCCGCAACC GCGTGCTGCA GTTCAGCGCG ATGCGGATTG TCTGCGACCT GCGGATCCAG TTGTTCGCGC ACCTGCAGAC GCTGTCGCTG CGGTATTTCG ATGCGAACCA GACGGGCAAG GTGATCTCCC GGATCACGCA GGACACCAAC GAAGTTTACC AGCTGACGAA CGGATTTCTC ATCACGGTGA TTGCGGACTC GGTGACGATC GCCGGCGTGC TCGGATTCTT GTTCTGGGTG GAGTGGCGGC TGGCGCTGGC GGTGACGCTG GTGCTGCCGC TCTTTGTGCT CAGTTACCTC TACAACCGCC GGAAGATGCG CGAGGAAAGC CGGGTGCACC GCGACAACTG GGACAAAGTC GTGGGCTTTC TGCACGAGCG CGTGGCCGCG GCGCGCGTGG TGAAATCGTT CACGCGCGAG GCGGAGGAGA CCAGTGCGTT CGCGAGCGGG ATCAACGCGG ACTATTTCAA TTATTCGAAC ATCGTCATGC GGAACACGCG GCTGTCGGTG ATCGCCGACA TCCTCGGTTC GCTGGGTGCG CTGATCGTGC TCGGCTACGG CGGACTGCTG GTGGTGCAGG GCGCGATGCA GGTCGGCACG CTGGTCGCGT TCAACGCCTA CATCGTTTTC ATCTTCCCGC CGATCGTGCG ATTCGTGGAT CTCGCGGCGG TGTTTCAGCG CGCGAACACC GCGCTGGAGA ACATGTGGGC GCTGCTCGAC ACGCAGCCGG ACATCGCCGA TCGCCCGGCG GCTTTGGCGC TGCCGCCGAT CCGCGGCGAG GTGGAGTTCC GCAAGGTGTG TTTCGATTAC GAACTCGAGC TGCCGGGGCA GGGGCGGCCG CGGACGTTGA CCGACGTGAG CTTCCATATT CCGGCGGGCC AGGTCGTCGC GATCGTCGGA CCGAGCGGTT CGGGCAAGAG CACGATCATC AATCTCGTCG CGCGGTTTTA CGACGTCGCG TCGGGACAGG TGTTGATCGA CGGCCAGGAC GTGCGCGAGG TGACCGTGCC CTCGCTGCGG CGGCAGATCG GAATCGTGCT GCAGGAGAAC GTGCTGTTTT CCGGGACGCT CGAGGACAAC ATCAAGTATG GCCGAACGGA GGCGACGCGC GCGGAGATCC AGGCGGCAGC TGCCGCGGCC AACGCGCACG AGTTCATCTC CGAGCTGCCG GACGGTTACG CCACGGTAGT CGGCGAACGC GGCGTGAAGC TGTCGGGCGG ACAGCGGCAG CGGATCGCGA TTGCGCGGGC GATCCTGCGC GATCCGCGGA TCCTGATCTT CGACGAGGCG ACGAGCGCCC TCGACACGGC GTCGGAGCGA CTGATCCAGC AGGCGATGGA GCGGCTGATG AAAGGCCGGA CGGCGTTCAT CATCGCGCAC CGGCTCTCGA CGATTCAGAA CGCGGACGTG ATCCTCGTGA TGGAGCAGGG CCGGCTCGCC GAGAAAGGCA CGCACGCCGA GTTGCTCGCG CGCGGCGGGC TCTACGCGAA ACTGCACGCG CTGCAGTTTC AGGAAGCGGG TTGA
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Protein sequence | MRGAELGRVR DLSRMRSGTF QRFLALTRPH RWRIALGIVL ILAATALTLP APWIFKLIID EALPQRDLSQ LGWLLVVFTA LFLLRGWLTL VRNRVLQFSA MRIVCDLRIQ LFAHLQTLSL RYFDANQTGK VISRITQDTN EVYQLTNGFL ITVIADSVTI AGVLGFLFWV EWRLALAVTL VLPLFVLSYL YNRRKMREES RVHRDNWDKV VGFLHERVAA ARVVKSFTRE AEETSAFASG INADYFNYSN IVMRNTRLSV IADILGSLGA LIVLGYGGLL VVQGAMQVGT LVAFNAYIVF IFPPIVRFVD LAAVFQRANT ALENMWALLD TQPDIADRPA ALALPPIRGE VEFRKVCFDY ELELPGQGRP RTLTDVSFHI PAGQVVAIVG PSGSGKSTII NLVARFYDVA SGQVLIDGQD VREVTVPSLR RQIGIVLQEN VLFSGTLEDN IKYGRTEATR AEIQAAAAAA NAHEFISELP DGYATVVGER GVKLSGGQRQ RIAIARAILR DPRILIFDEA TSALDTASER LIQQAMERLM KGRTAFIIAH RLSTIQNADV ILVMEQGRLA EKGTHAELLA RGGLYAKLHA LQFQEAG
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