| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1515 |
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| Symbol | |
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| ID | 6205431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1878406 |
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| End bp | 1879623 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691156 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001818399 |
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| Protein GI | 182413333 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG AACGCCCCTC CCTCGCCGGA TTGCGCATTG ATCGGTCCAA TGCGCCCCGC
CGCACGTTCT TCACTCCGCC GGTGATCGGC ACCGTCGTCG TGCTGCTGTT GCTCGCCGCC
GCGGCGGCGT GGTGGTTCAC GCGCCCGAAG CCCTTCCCGG TTCGCACCGC ACCGGCCCGC
GAGATCGCCG CCGGCGAACA GGCCACGCTG CTCAACGCCT CCGGCTACGT GACCGCGCGA
CGCTGGGCCA CCGTTTCCTC GAAGGTGATG GGCAAGATCA TCGAGGTGCT CGTCGACGAG
GGCGCGCGCG TCGAGGCGGG TCAGGTCCTC GCGCGGATCG ACGCGTCCAA CACGGAGGCC
AATCTGCGGC TCGCCGAGTC GCAGCTCGAC GCCGCCCGGA AGGCGCTGGC CGAAACCGAA
GCGCAGCTCG AGCTGGCCGA GCTCGACTTG AAGCGCCAGC GCGAGCTCGC CGCCAAGCAG
ATCGTGAGCC CCGCCGACCT CGACCGCGCC GAGTCCGCCG CGCGCGCGCT CCGCGGCCGA
CGCGAGCGCG GCTTGTCCGA GATCGTCGTG GCTCAACGCC AGGTCGACGT CTGGCGGCAA
CAGCTCGACG ACACGGTCAT TCGCGCGCCG TTCGCCGGCG TCGTGACCTC GAAGAACGCG
CAGCCCGGTG AGATGATTTC ACCGATGTCC TCGGGCGGAT TCACCCGCAC CGGCGTCTGC
ACGCTCGTCG ACATGAGCTC GCTCGAGATC GAGGTCGATG TGAACGAGAG CTACATCAAC
CGCGTCACCG CCGGCCAGCC GGTGGTCGCC ACGCTCGACT CGTATCCCGA CTGGAAAATC
CCCTCGCGCG TGATCGCGAT CATCCCCACC GCCGATCGGC AGAAGGCCAC GGTGAAAGTG
CGCGTGGGTT TCGATCAGCT CGACCCGCGT ATCCTTCCCG ACATGGGCGT GAAGGTCGCT
TTCCAAAGCA CCACGCCCGC CGCGCAGCCG GCCGCGCGCA CCGTCGTGGT ACCGCGCTCC
GCCGTGCGTT CGCGCCAGGG GCGCGACATC GTGTGGGTCG TCGAACGCGA TCGCGTCACC
TCGCGCGCCG TCACCGTCGC CAACAAGAAC GGCGATGAGT TTACCCTTTC AGCCGGGCTC
AACGGCGGCG AACTCATCGT CGTCGAAGGA CCGGAAGACC TCAGCGACGG CGCCCTCGTT
ACGGAAAAGA AGCCATGA
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| Protein sequence | MSAERPSLAG LRIDRSNAPR RTFFTPPVIG TVVVLLLLAA AAAWWFTRPK PFPVRTAPAR
EIAAGEQATL LNASGYVTAR RWATVSSKVM GKIIEVLVDE GARVEAGQVL ARIDASNTEA
NLRLAESQLD AARKALAETE AQLELAELDL KRQRELAAKQ IVSPADLDRA ESAARALRGR
RERGLSEIVV AQRQVDVWRQ QLDDTVIRAP FAGVVTSKNA QPGEMISPMS SGGFTRTGVC
TLVDMSSLEI EVDVNESYIN RVTAGQPVVA TLDSYPDWKI PSRVIAIIPT ADRQKATVKV
RVGFDQLDPR ILPDMGVKVA FQSTTPAAQP AARTVVVPRS AVRSRQGRDI VWVVERDRVT
SRAVTVANKN GDEFTLSAGL NGGELIVVEG PEDLSDGALV TEKKP
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