Gene Oter_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1512 
Symbol 
ID6204484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1874956 
End bp1876146 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content68% 
IMG OID641691153 
Producthypothetical protein 
Protein accessionYP_001818396 
Protein GI182413330 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.574186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACT GGATCATCCA AGTCTTCTCG ATCACCGCGT CGTTCCTAAA ATCGCTCCCG 
GAGCGCCGCG GCATGGCGAT CGCCGCGACG GTCGGCATCG CCGGTGTCGT CGCGGTGCTC
GTCGGCGTGC TGTCGATGGC CGAAGGTTTC CGGCGTGCCA TGACGGTTTC CGGTGATCCG
GGCATCGCGC TCGTGCTGCG CGCCGGCGCC GACACGGAAA TGACCAGTGG ACTCGGCCGC
GGCGAAACGC GGCTGATCGC CGATGCGCCC GGGCTTGCGC GCAACGCCGC CGGTCCGCTC
GCCTCCGCCG AGCTGTTCGT GATCATCAGT CTCCCGAAGC GCTCGACCGG CACCGACGCC
AACATCGCGC TGCGCGGCAT CTCGCCCGCC GCCTACGAGG TGCGCGGCAA CATCCAGCTG
CTGTCCGGCC GCCGGTTCGA AGCCGGTCGC AACGAGGTGA TCGTCGGCGC CGGCGCGGCG
CGACACTTTG CGGGGCTCGA TCTCGGCCAC ACGATCCGCG TCGGCCAAAA CGACTGGACC
GTCGTCGGCA TCTTCTCCGC CGCCGGCGGC GTGGCCGAAT CGGAAATCTG GACCGACGCC
GCCGTGTTGC AGCCCGCCTA CCAGCGCGGC GACAGCTACC AGGCCGTCTA CGCGCGGCTG
AGTTCGCCCG AATCTTTCCA GGAGTTCCGC GATGCGCTCA CCACGAATCC GCAGCTCAAC
GTGAAGGTCG TCCGGCAGTC GGAGTTTTAC GCGGAGCAGT CGTCACTGGT CACCACGTTC
ATTCGCAGCA TCGGCCTCGC GATCGCCGGA CTGATGGCGC TGGGCGCGCT GTTCGGCGCG
CTCAACACGA TGTACAGCGC GGTATCCGCG CGCACCCGCG AGATCGCGAC GTTGCGTGCA
CTCGGCTTCG GCTCGGGTGC GGTGATCGTG TCCGTGCTGC TCGAATCGCT CGCGCTGGCA
CTGCTCGGCG GCGCGTGCGG CGGACTGCTG GCGTATCTCG CCTTCGACGG GTTCACGGCC
TCGACGATCA ACTGGCAGAC GTTCAGCCAG GTGGCGTTCG CGTTCACCGT CTCGCCCGAG
TTGCTTGTGC GCGCGATCAC GTGGGCGGCG TTCATCGGCG TGCTCGGCGG CTTTTTCCCT
GCGATCCATG CCGCCCGCAT CCCAATCGCG ACCGCGCTCC GGGAAACGTG A
 
Protein sequence
MINWIIQVFS ITASFLKSLP ERRGMAIAAT VGIAGVVAVL VGVLSMAEGF RRAMTVSGDP 
GIALVLRAGA DTEMTSGLGR GETRLIADAP GLARNAAGPL ASAELFVIIS LPKRSTGTDA
NIALRGISPA AYEVRGNIQL LSGRRFEAGR NEVIVGAGAA RHFAGLDLGH TIRVGQNDWT
VVGIFSAAGG VAESEIWTDA AVLQPAYQRG DSYQAVYARL SSPESFQEFR DALTTNPQLN
VKVVRQSEFY AEQSSLVTTF IRSIGLAIAG LMALGALFGA LNTMYSAVSA RTREIATLRA
LGFGSGAVIV SVLLESLALA LLGGACGGLL AYLAFDGFTA STINWQTFSQ VAFAFTVSPE
LLVRAITWAA FIGVLGGFFP AIHAARIPIA TALRET