| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1494 |
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| Symbol | |
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| ID | 6205117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1855836 |
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| End bp | 1857191 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691135 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001818378 |
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| Protein GI | 182413312 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGA TCCTGCGCGA GATCCGGCCG ACGCTGCTGC TGGCCTTCCC GATCATCCTC
GGGCAGCTCA GCCAGATGCT GATCGGGATC ACGGATAACG CGATGATCGG CCGGATCGGC
ACGGTGCCGC TCGCCGCCGC AGCGTTCACG CATGGCGTCT TCGGCGTGTT TTATGTGACC
GGCCTGGGCC TGCTGATGGG CGTGGGCGTA CTGGCGGCGC GCGATGCGGG CGCGGGGCAG
CTCGCGAGCT GCGCGGCGTG GCTGCGGCAA GGTCGCGCAT TGGCCCTCGT GGTCGGGGGC
GGCGCGTTCG GGGCCCTCGC CATCGCGTCC ACGCAGCTGC ATCGGTTCGG TCAACCGCCG
GAAGTGGTGG CGATCGTGCG GCCGTTCTTT CTGTTGATTT CACTGTCGCT GGTGCCGGTA
CTGTTTTTCC AGGTGCAGCG GCAGTTCGCG GAATCGCTCG GCCGGCCGTG GGTACCGATG
GTGATCATGC TCGGCGACGT CGTCGTGAAC GCCTGGCTCA ACTGGCTGCT GATCTGGGGA
CACTGGGGCC TGCCGGCGCT CGGCTTGTTC GGCTCGGGCT TGGCGACGCT GCTGGCGCGT
ACGTTCGCCG TGGGCGCGAT CGCACTGTGG ATCCGGCGCG CGGCGACCTT CAAGCCGGTG
CGGACTGCGC CGCCTCTGCG CTGGACCCGG CAGCGCTGGC GCGCGTTGCT CGGCATCGGC
GTCCCGACGG CGGGCAGCTT GCTGTTCGAG TCGGGCGCGT TTGCGGCCGC GGCGTTGATG
ATGGGCTGGC TCGGCGCCAC CGCGTTGGCG GCGCATCAAA TCGCGCTGAG CTGCGCGGCT
TCGACGTTCA TGTTTCCGCT GGGGCTTTCG ATGGCCGTGA GCCTGCGGCT GAGTCGCTCG
CTGGGCGAAG GCGAGCGCAC AATCCTGCGG CCGATCTGGC TCGGCGCGCT GGGAGTCTCG
ACGCTGCTGA TGGCGACGTT TGCGGCGGTG TTCGTCGTGG CCGGCGGGCT CCTCGCGCGG
GGCTTCACGA CCGATCCGGC GGTCATCTCA GTGGCGGCGC AACTGCTGAT CGTCGCGGCC
TTTTTCCAAG TATTCGACGG CGCGCAGGTC GTCGGCGCGG GCGCGTTGCG TGGGCTCACC
GACGTGAAGC TGCCGACGCT GATTACGTTC TGTGCCTACT GGGTCCTCGC GCTGCCCGGC
GCGTATCTGC TCGGCGTGCG CGGAGGTTTT GGACCGACGG GGATATGGAC GGCCCTGGCG
CTTGGGCTCG GCTGCGCGGC GTTGCTACTG GCGCTGCGGT TTCACCTGCT GACGGCGGGG
ACAGCGGCGA GCGGGGCGCT GCGAGGCCGG AACTGA
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| Protein sequence | MQPILREIRP TLLLAFPIIL GQLSQMLIGI TDNAMIGRIG TVPLAAAAFT HGVFGVFYVT
GLGLLMGVGV LAARDAGAGQ LASCAAWLRQ GRALALVVGG GAFGALAIAS TQLHRFGQPP
EVVAIVRPFF LLISLSLVPV LFFQVQRQFA ESLGRPWVPM VIMLGDVVVN AWLNWLLIWG
HWGLPALGLF GSGLATLLAR TFAVGAIALW IRRAATFKPV RTAPPLRWTR QRWRALLGIG
VPTAGSLLFE SGAFAAAALM MGWLGATALA AHQIALSCAA STFMFPLGLS MAVSLRLSRS
LGEGERTILR PIWLGALGVS TLLMATFAAV FVVAGGLLAR GFTTDPAVIS VAAQLLIVAA
FFQVFDGAQV VGAGALRGLT DVKLPTLITF CAYWVLALPG AYLLGVRGGF GPTGIWTALA
LGLGCAALLL ALRFHLLTAG TAASGALRGR N
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