| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1424 |
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| Symbol | |
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| ID | 6205069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1787258 |
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| End bp | 1788100 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691066 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001818309 |
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| Protein GI | 182413243 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.46169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGTC AAGTGGCCGA GGCGCGGAGG TTTTATGTGG AACGAACCTC GGACGGCGGG
CCGGGACCGT TCGTGGTCGG CGGCGGCTGG GAGCGCTGCG CGGTGGACTA TGAGATCCGG
CGAGCAGGGT TTCCGCACGT CACGCTCGAG TTCGTGGCGG GGGGGCGCGG CGATCTGCAG
ATGAACGGCC GATCGCATGC GCTGACCCGC GGCTGCGTGT TCGCTTACGG CCCGGGGATT
GCGCACGCGA TCACGACCGA TCCCGCGGAC CGATTGTCCA AATACTTCGT CAACTTTTCG
GGCCGTGGTG CTGCGGCCGT GATGCGGTCT GCGGGGCTGA CGCTGGGCGA ATGTCACGCG
GTGGCCGCGG TCGACGAGGT GCAGGCAGCA TTCGAGCAGT TGTTGTTCGC CGGGCGACGC
GGCACGCGAA CCGGAGCGCG GATCGCGGCG CTGCAGGGGC AGATCCTGCT GCTGCTGGTG
TCCGAGGTCC GGTTGCCCAA CGCACAGCGG TCGAATCCGT CGCTCGCCAC CTTCCTGCGG
TGCCAGCGTT TCCTGGAGGA ACATTTTCTG GCCGTGAGCA CCGCGGAGGA GGCGGCGGCC
GCTTGTCGGG TGGCGCCGGC GTATCTGAGC CGGTTGTTCC AGCGGTTCGC CGGCCAACCG
CCCTATCGAT TCTTGATGCG GTTGAAGATG CACCATGCGG CCACGCTGCT GGAGGAGAAA
CAACTGATCG TGCGCGAGGC GGCGGACGTG CTGGGGATGG ATCCGTTCCA TTTCTCCCGG
GCCTTCAAGC GCGTGCACGG GCTGTCGCCG CTGGCGTTTC TGCGGAGTCG CAGCACGGGA
TGA
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| Protein sequence | MSSQVAEARR FYVERTSDGG PGPFVVGGGW ERCAVDYEIR RAGFPHVTLE FVAGGRGDLQ
MNGRSHALTR GCVFAYGPGI AHAITTDPAD RLSKYFVNFS GRGAAAVMRS AGLTLGECHA
VAAVDEVQAA FEQLLFAGRR GTRTGARIAA LQGQILLLLV SEVRLPNAQR SNPSLATFLR
CQRFLEEHFL AVSTAEEAAA ACRVAPAYLS RLFQRFAGQP PYRFLMRLKM HHAATLLEEK
QLIVREAADV LGMDPFHFSR AFKRVHGLSP LAFLRSRSTG
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