| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1419 |
|---|
| Symbol | |
|---|
| ID | 6206414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1781273 |
|---|
| End bp | 1782352 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641691061 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001818304 |
|---|
| Protein GI | 182413238 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACAT GTGGCGCAAC TCCCCCTATT GGCCGCGGCG CCAACATTAA TCCGCCGAAC
CGGTTCGAGT CGCAGCACCT GAGCCTCGAT CCCGCGGATG CCGAGTGGTG CGACTGCCCA
CCGGAGGAAC GCCCGAATCC CCGCACGCAG TTTTTCTTCG ACGCCAGCGA ATCGCTGCTG
ACGCGCAATC AAAGTCCCGA CGTCGGTTTC GAATACGGGC TCAACCCTTA CCGCGGCTGT
GAGCACGGCT GCGCCTACTG CTTCGCCCGG CCATTTCACG AGTATCTCGG CTGGAGCAGC
GGGCTCGATT TCGAAACCAA GATTCTCGTG AAACTGCGCG CGCCCGAGTT GCTTCGCCGC
GAGTTGGGCG CGCCACGCTG GCAGCCGCAG CTGATCGCCA TGAGCGGAGT CACCGACTGC
TACCAGCCGG CCGAACGCCA TTTCCGGCTG AGTCGTCACT GCCTGGAGGT CTGCGCCGAG
CTGCGGCACC CGATTTCGAT CATCACGAAA AACGCGTTGG TCACTCGCGA TCTCGACGTG
CTGCGCGAAC TCGCCCGCTG GCACTGCGTC CGCGTGAACT TCTCTGTCAC GACGCTCGAC
AGCACGCTGG CCGGCAAGCT GGAGCCACGC GCCTCGCGGC CGCCGGCACG GCTCAACGCG
ATCCGCGAAT TGAGCGCCGC CGGGATCCCC GTGGGCGTGA TGGTCGCGCC GACCATCCCC
GGGCTCACGG ATCACGAGCT GCCCGGAATC CTCGCCGCCG CGGCGGCGGC GGGCGCGCGG
CAGGCGGGCT ATATCGTTTT GCGCCTGCCA TATTCGGTGA AGGACGTGTT CCTGCGCTGG
CTCGACGATC ACGAGCCAGA CAAGAAAGCG CGCGTCGTCG AGCGGCTGCG CGCGCTTCGC
GGCGGCTCGC TCTACGACAG CGACTGGGCG CAGCGCTGGA GCGGACAAGG CATCTGGGCC
GAACACCTGC GCCGCGTCTT CGAGATCGCT TGCCGTCGGC ACGGCCTGAA CGACGAAAGC
CCCGCGCTGT CCACGGAGCA TTTCCGCCGT CCGGGTGGAA ATCAGCTGGA GTTGTTTTGA
|
|---|
| Protein sequence | MNTCGATPPI GRGANINPPN RFESQHLSLD PADAEWCDCP PEERPNPRTQ FFFDASESLL
TRNQSPDVGF EYGLNPYRGC EHGCAYCFAR PFHEYLGWSS GLDFETKILV KLRAPELLRR
ELGAPRWQPQ LIAMSGVTDC YQPAERHFRL SRHCLEVCAE LRHPISIITK NALVTRDLDV
LRELARWHCV RVNFSVTTLD STLAGKLEPR ASRPPARLNA IRELSAAGIP VGVMVAPTIP
GLTDHELPGI LAAAAAAGAR QAGYIVLRLP YSVKDVFLRW LDDHEPDKKA RVVERLRALR
GGSLYDSDWA QRWSGQGIWA EHLRRVFEIA CRRHGLNDES PALSTEHFRR PGGNQLELF
|
|---|
| |