Gene Oter_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1408 
Symbol 
ID6204579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1770130 
End bp1771506 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content68% 
IMG OID641691050 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001818293 
Protein GI182413227 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCGT TCACCGCCCG TGTCACCTGG CAATTCGCGG CGCTCGTCAC GGCGACGACC 
GCGTTGGTGC TGGCCGTGGG CGGCTGGCTG CAGTCGCGCG CCGCGGTGCG CGGGCTCGAT
TTTCTCAACG CGGCGGAGTT CGAGGAGCTG CACGCCCGGC TGGGCGAGGA ACCGCGCGGA
GTGACGCGTC AGGAAGTGGA TCAACGCGTG CGCGCGCATG CGACGATCGA TGCTTCCCAA
TATTATTTTC AAGTCAGCAC GCGCTCCGGC GTGGTGCTGT TTCGCTCGGA CAACCTCGAC
GACCTGCAGC TACCCCTGCC GCAGACCGAG CAGCGGCAGT CGGCGGTGCT GCCCGAGATC
GGCCGTGTGC GGGTGGCCGA ATTCGTGACC GGTGATCTGC GGGTGCAGAT CGCCAGTTCG
CTCGAACCGG TGGAGCGGTT GCTGGGCGCC TATGCGCAGA CGAGCCTGAT GCTGCTCGGC
GGCGTGGCGC TGGCGAGTGT GGGACTCGGC TGGTATTTCG CGCGGCTGAC GCTGCGGCCA
GTGCGGGCCA TCCGCGAAAC GGCCAGCCGG ATCGGCGCGG AGACGCTGAG TGAACGCATT
CCGCTGCCGC CGGGCCGCGA CGAACTGACG GCGCTGGCGG ATTTGCTGAA CCAGATGTTC
GACCGGCTGG AAGGGTCGTT CGCGCAGGTG AAGCGGTTCA CCGCGGACGC GTCGCACGAG
CTGAAAACAC CGCTGGCGCT GCTGCGGCTC AACGCCGAGA AGCTGCGCGG CCGACTGGCG
GCCGATGCGG AGGCCAGCGC GGCGGTCGAC GAGATGCTGG AGGATCTCGA TGCGTTGCGT
CGGGTGATCG ACACGCTGCT GTTTCTCGCC AAGGCGGAGA GCGGCAGCCT GGCGCCGGCG
ATGAGCGAAA TTTCCGCGGC GGAGTGGGTG AGGAGTTTTG GCGAAGATGC GGCCGTGATG
AGCGAGGAGC GCGGTGTGGT TTTTGCAGTG ACGCGCGCGG ATGCAGGCGC CGTGCAGTGT
GAACCGACGC TCGTCCGGCA GGTGTTGCTC AACCTGCTCA CCAACGCGCT GCGGGTCGTG
CCGGCGGGCG GACGGATCGA ACTCGAATCC ACCGTGACCG AAACGAGCTG GCGGTTGACG
ATGTCCGACG AAGGTCCGGG GCTGCCGCGC GAACAGGTGG AGCGGGTTTT CGAGCGATTT
GTGCGGTTCG CGCATGGCGC GGTGGACGAC GCGCAGCCGA ACGGGCACGG GCTCGGGCTG
GCCATTTGCC GGAGTATCGC GGGGCTCCAC GGTGGGCGGA TTCACGCCGA GAACCGGACG
GAGCGTAGGG GCTTGCGCGT CGTGCTCGAG CTGCCCATTT CTGGCGTTCG CTCGTGA
 
Protein sequence
MRSFTARVTW QFAALVTATT ALVLAVGGWL QSRAAVRGLD FLNAAEFEEL HARLGEEPRG 
VTRQEVDQRV RAHATIDASQ YYFQVSTRSG VVLFRSDNLD DLQLPLPQTE QRQSAVLPEI
GRVRVAEFVT GDLRVQIASS LEPVERLLGA YAQTSLMLLG GVALASVGLG WYFARLTLRP
VRAIRETASR IGAETLSERI PLPPGRDELT ALADLLNQMF DRLEGSFAQV KRFTADASHE
LKTPLALLRL NAEKLRGRLA ADAEASAAVD EMLEDLDALR RVIDTLLFLA KAESGSLAPA
MSEISAAEWV RSFGEDAAVM SEERGVVFAV TRADAGAVQC EPTLVRQVLL NLLTNALRVV
PAGGRIELES TVTETSWRLT MSDEGPGLPR EQVERVFERF VRFAHGAVDD AQPNGHGLGL
AICRSIAGLH GGRIHAENRT ERRGLRVVLE LPISGVRS