Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1407 |
Symbol | |
ID | 6207592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1769289 |
End bp | 1770086 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641691049 |
Product | two component transcriptional regulator |
Protein accession | YP_001818292 |
Protein GI | 182413226 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTGA TCGCAGCGGA CGAGTCGGCG GACGAGCCCA GCGGCTCGTC CGCGGGCGGG GAGCTTGGCG GGTCGGCGGA GAGTTACGCT CGCTTTTCCG ACGCAGCCGG GCTGTATCTG CCGTTGAATG CGATGAAGAT ACTCGTGGTC GAGGACGAGC GCCGCGTCGG GCAGTTCGTC GAGAAGGCGC TGACGGAGCA AAACTACACC GCGCGGTTGG TGCGCACCTG CGCCGAGGCC CGCGATGTGC TGGCGGAATC GACCTTCGAC GCCGTGGTGC TGGATCTGGG GCTGCCGGAC GGCGACGGAC TCGATCTGCT GCGGGAGTGG CGGGCCAGCG GGTTCAACGA ACCGGTGCTC GTGCTGAGCG CGCGCGACGC CGTCGGCGAT CGCGTGCGCG GGTTGAACAT GGGTGCGGAC GATTATCTGC CGAAGCCGTT CAGCGTCGAC GAAGTGGTGG CGCGGGTCCG GTCTTTGCTG CGGCGGCATG CGGGCGTGAA GACGACCGTG CTCACCCACG GACCGGTGCG CATGGACTTG CTCGGTCGCA GCGTCACCTG CGCCGGCCGG CCGGTCGAGC TGACCAGCCG CGAATACGCG CTGCTGGAGC TGTTCCTGCA GAATCCGCGC CGGGTGCTGA CGCGGACGCT GATCGCGGAA AAGGTATGGG AGGCGAGTTA CGATCTCGAG ACCAACCTGA TCGACGTCTA CGTACGCCGG CTGCGCCAGA AGCTCGAGGC GCCCGGCCAG CCGCCGCTGA TCAAGACGAT TCGCGGCACC GGTTATCAGC TTTCGTGA
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Protein sequence | MDLIAADESA DEPSGSSAGG ELGGSAESYA RFSDAAGLYL PLNAMKILVV EDERRVGQFV EKALTEQNYT ARLVRTCAEA RDVLAESTFD AVVLDLGLPD GDGLDLLREW RASGFNEPVL VLSARDAVGD RVRGLNMGAD DYLPKPFSVD EVVARVRSLL RRHAGVKTTV LTHGPVRMDL LGRSVTCAGR PVELTSREYA LLELFLQNPR RVLTRTLIAE KVWEASYDLE TNLIDVYVRR LRQKLEAPGQ PPLIKTIRGT GYQLS
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