Gene Oter_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1390 
Symbol 
ID6205469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1741150 
End bp1742175 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID641691032 
Productarabinan endo-1,5-alpha-L-arabinosidase 
Protein accessionYP_001818275 
Protein GI182413209 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.287204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.664348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTCA TCCCCACCTC TGTTCGCCAC CTCCTTTGGC TGGTTGTGGC GGCGCTCGCC 
GCCAGCGCTT CGGCCCGACA GGTCAGCATT CACGATCCCG TGATGGCCAA GGAAGGCGAC
ACGTTCTACC TGTTCAGCAC CGGCCCGGGC ATCACGCTCT ACAGCAGCAA GGACATGAAA
ACGTGGGAGC TGCGCGGCCG GGTTTTCCCG GGCGATCCGA CGTGGGCGAA GTCCGTGGCG
CCGAGCTTCA ACGGTCACAT CTGGGCGCCG GACATCGTCC AGCATGACGG CAAGTTCTAC
CTTTACTATT CGGTGTCGGC GTTTGGCCGC AACACGTCGG CAATCGGCGT GACGATCAAC
CGGACGCTGA ACCCCGATTC GCCGGACTAC CAGTGGGAGG ATCAGGGGAT CGTGCTGCGT
TCGGTACCGA ACCGCGATCT CTGGAACGCG ATTGATCCGG CGGTGATCGC CGACGAACAG
GGCACGCCGT GGATGAGCTT CGGGTCGTTC TGGGGCGGGC TGAAACTGGT GAAGCTGGCT
CCGGACTGGA AGTCGGTCGC GGAGCCGCAG GAGTGGTATT CGCTCGCGAA GCGCGAGCGT
TCCGTGCTGA TCAGCGACAC CGAGGCGGGC CCGGCGGAGA TCGAGGCGCC GTTCATCTTC
CGCAAGAATG GCTATTACTA CCTCTTCATG TCGTGGGACA AATGCTGCCG CGGCAAGGAC
AGCACTTACA AGCTGCTCGT CGGTCGTTCC AAGACGCTGA CCGGTCCGTA CGTCGATCGT
ACGGGCAAGC CGCTGGCGCA GGGCGGCGGC ACGCTGGTGC TCGCGGGCAA TGCGGACTGG
GCGGGGCTCG GGCACAACAG CGTCTACACG TTCGACGGAA AGGACTACCT CGTCTTTCAC
GCCTATGAGA ACGCGGATAA CGGGCTGCAG AAGCTCAAGA TCGCCGAGCT GACGTGGGAC
TCTGCGGACT GGCCGGTGGT CGACGAGCGT GTGCTGCGCG ATTACGTGAG CGAACTGGTG
CGGTGA
 
Protein sequence
MHLIPTSVRH LLWLVVAALA ASASARQVSI HDPVMAKEGD TFYLFSTGPG ITLYSSKDMK 
TWELRGRVFP GDPTWAKSVA PSFNGHIWAP DIVQHDGKFY LYYSVSAFGR NTSAIGVTIN
RTLNPDSPDY QWEDQGIVLR SVPNRDLWNA IDPAVIADEQ GTPWMSFGSF WGGLKLVKLA
PDWKSVAEPQ EWYSLAKRER SVLISDTEAG PAEIEAPFIF RKNGYYYLFM SWDKCCRGKD
STYKLLVGRS KTLTGPYVDR TGKPLAQGGG TLVLAGNADW AGLGHNSVYT FDGKDYLVFH
AYENADNGLQ KLKIAELTWD SADWPVVDER VLRDYVSELV R