Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1382 |
Symbol | |
ID | 6205643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1728360 |
End bp | 1729874 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691024 |
Product | L-arabinose isomerase |
Protein accession | YP_001818267 |
Protein GI | 182413201 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.326225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.788134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCC TCGCCACTCC CGAAATCTGG TTCGTCTGCG GCTCGCAGCA TCTCTACGGC CCCGGCCCGC TCAAGCAGGT CGCCGCCAAC GCGCAAAAGG TCGCCGCCGG CCTCGCCGCC TCAAAGAAGA TTCCTCTGAA GATCGTCTTC AAGGCGCTGC TCACCACGCC CGATGAGATC ACCAACCTCT GCATCGAGGC GAACTCCGAC GCGAACTGCG CCGGGCTCAT CCTGTGGATG CACACGTTCT CGCCGGCGAA GATGTGGATC CGCGGACTGA GCACGCTGAA GAAGCCGTTC TGCCATCTGC ACACGCAGTT CAACCGCGAC CTGCCGTGGG GCGACATCGA CATGGATTTC ATGAACCTCA ACCAAGCGGC CCACGGCGAC CGCGAGGCGG GTTTCCTCCA CACGCGACTG CGGCTCAACC GCAAGGTCGT CGTCGGCCAC TGGTCGGACG CCGAGGTGCA GGAACGCATT GGCGCCTGGG TGCGCGCCGC GCGCGCGTGG CACGACTGGC AGGGCGCGAA GTTCGCCCGC TTCGGCGACA ACATGCGTTT CGTCGCCGTC ACCGAAGGCG ACAAGGTCGC CGCCGAACTC CGCTTCGGTT TCTCGACCAA CGGCTACGGC GTGGGCGATC TGGTCGCGAA GGTCGCGAGC GAAGGCATCA ACGATCGCCA CGTCGACGAG CTCTGCGCCG AGTACGAGAA GCGTTACGCC GTCGCGAAGG AGCTGCGCCG CGGCGGCAAG CGCCACGACT CGCTCCGTTA CGGCGCGCGG ATCGAGCTCG GCCTCCGCAC GTTTCTCGAG GAGGGCAGCT TCAAGGGCTT CACGACGACA TTCGAGGATC TGCATGGCCT GCGCCAGCTG CCCGGACTCG CGGTCCAGCG GCTGATGGCC GACGGCTACG GGTTCGGCGC CGAGGGCGAT TGGAAAACCG CCGCGCTGCT CCGCGCGATG AAGGTGATGG GCGAAGGCCT GGATGGCGGC ACCTCGTTCA TGGAGGATTA CACTTACCAC ATGAACCCGA AGGGCCATCA GGTCCTCGGC GCGCACATGC TCGAGATCTG CTCGACCATC GCCGCGACCA AGCCGTCGCT GGAAATTCAT CCGCTCGGGA TCGGCGGCAA GGAGGATCCG GTCCGGCTCG TGTTCGACGC GCCCGCCGGC CCCGCGCTCA ATGCCTCGCT GATCGACATG GGCAACCGTT TCCGGCTGCT CGTGAACGAG GTCACGGCCG TGAAGACGCC GAAGCTCCCG AAGTTGCCCG TCGCCCGCGC GGTCTGGGAA TGCCAGCCCG ATTTCAAGAC CGCCTGTGCG GCGTGGATCT ACGCCGGCGG CGCGCACCAC ACCGGCTACA GCTACAGCGT GACGACCGAG ATGCTCGAGG ACTTCGCCAA CATCGCCGGC ATCGAGCTCG CGGTGATCAA CGCCGACACG AAGCTCGGCG AGTTCAAACA GACGCTGCGC AACAACGAGG TCTACTACCA CCTCGCCCAA GGCATCCGGG TTTGA
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Protein sequence | MKLLATPEIW FVCGSQHLYG PGPLKQVAAN AQKVAAGLAA SKKIPLKIVF KALLTTPDEI TNLCIEANSD ANCAGLILWM HTFSPAKMWI RGLSTLKKPF CHLHTQFNRD LPWGDIDMDF MNLNQAAHGD REAGFLHTRL RLNRKVVVGH WSDAEVQERI GAWVRAARAW HDWQGAKFAR FGDNMRFVAV TEGDKVAAEL RFGFSTNGYG VGDLVAKVAS EGINDRHVDE LCAEYEKRYA VAKELRRGGK RHDSLRYGAR IELGLRTFLE EGSFKGFTTT FEDLHGLRQL PGLAVQRLMA DGYGFGAEGD WKTAALLRAM KVMGEGLDGG TSFMEDYTYH MNPKGHQVLG AHMLEICSTI AATKPSLEIH PLGIGGKEDP VRLVFDAPAG PALNASLIDM GNRFRLLVNE VTAVKTPKLP KLPVARAVWE CQPDFKTACA AWIYAGGAHH TGYSYSVTTE MLEDFANIAG IELAVINADT KLGEFKQTLR NNEVYYHLAQ GIRV
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