Gene Oter_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1382 
Symbol 
ID6205643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1728360 
End bp1729874 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content66% 
IMG OID641691024 
ProductL-arabinose isomerase 
Protein accessionYP_001818267 
Protein GI182413201 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2160] L-arabinose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.326225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.788134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC TCGCCACTCC CGAAATCTGG TTCGTCTGCG GCTCGCAGCA TCTCTACGGC 
CCCGGCCCGC TCAAGCAGGT CGCCGCCAAC GCGCAAAAGG TCGCCGCCGG CCTCGCCGCC
TCAAAGAAGA TTCCTCTGAA GATCGTCTTC AAGGCGCTGC TCACCACGCC CGATGAGATC
ACCAACCTCT GCATCGAGGC GAACTCCGAC GCGAACTGCG CCGGGCTCAT CCTGTGGATG
CACACGTTCT CGCCGGCGAA GATGTGGATC CGCGGACTGA GCACGCTGAA GAAGCCGTTC
TGCCATCTGC ACACGCAGTT CAACCGCGAC CTGCCGTGGG GCGACATCGA CATGGATTTC
ATGAACCTCA ACCAAGCGGC CCACGGCGAC CGCGAGGCGG GTTTCCTCCA CACGCGACTG
CGGCTCAACC GCAAGGTCGT CGTCGGCCAC TGGTCGGACG CCGAGGTGCA GGAACGCATT
GGCGCCTGGG TGCGCGCCGC GCGCGCGTGG CACGACTGGC AGGGCGCGAA GTTCGCCCGC
TTCGGCGACA ACATGCGTTT CGTCGCCGTC ACCGAAGGCG ACAAGGTCGC CGCCGAACTC
CGCTTCGGTT TCTCGACCAA CGGCTACGGC GTGGGCGATC TGGTCGCGAA GGTCGCGAGC
GAAGGCATCA ACGATCGCCA CGTCGACGAG CTCTGCGCCG AGTACGAGAA GCGTTACGCC
GTCGCGAAGG AGCTGCGCCG CGGCGGCAAG CGCCACGACT CGCTCCGTTA CGGCGCGCGG
ATCGAGCTCG GCCTCCGCAC GTTTCTCGAG GAGGGCAGCT TCAAGGGCTT CACGACGACA
TTCGAGGATC TGCATGGCCT GCGCCAGCTG CCCGGACTCG CGGTCCAGCG GCTGATGGCC
GACGGCTACG GGTTCGGCGC CGAGGGCGAT TGGAAAACCG CCGCGCTGCT CCGCGCGATG
AAGGTGATGG GCGAAGGCCT GGATGGCGGC ACCTCGTTCA TGGAGGATTA CACTTACCAC
ATGAACCCGA AGGGCCATCA GGTCCTCGGC GCGCACATGC TCGAGATCTG CTCGACCATC
GCCGCGACCA AGCCGTCGCT GGAAATTCAT CCGCTCGGGA TCGGCGGCAA GGAGGATCCG
GTCCGGCTCG TGTTCGACGC GCCCGCCGGC CCCGCGCTCA ATGCCTCGCT GATCGACATG
GGCAACCGTT TCCGGCTGCT CGTGAACGAG GTCACGGCCG TGAAGACGCC GAAGCTCCCG
AAGTTGCCCG TCGCCCGCGC GGTCTGGGAA TGCCAGCCCG ATTTCAAGAC CGCCTGTGCG
GCGTGGATCT ACGCCGGCGG CGCGCACCAC ACCGGCTACA GCTACAGCGT GACGACCGAG
ATGCTCGAGG ACTTCGCCAA CATCGCCGGC ATCGAGCTCG CGGTGATCAA CGCCGACACG
AAGCTCGGCG AGTTCAAACA GACGCTGCGC AACAACGAGG TCTACTACCA CCTCGCCCAA
GGCATCCGGG TTTGA
 
Protein sequence
MKLLATPEIW FVCGSQHLYG PGPLKQVAAN AQKVAAGLAA SKKIPLKIVF KALLTTPDEI 
TNLCIEANSD ANCAGLILWM HTFSPAKMWI RGLSTLKKPF CHLHTQFNRD LPWGDIDMDF
MNLNQAAHGD REAGFLHTRL RLNRKVVVGH WSDAEVQERI GAWVRAARAW HDWQGAKFAR
FGDNMRFVAV TEGDKVAAEL RFGFSTNGYG VGDLVAKVAS EGINDRHVDE LCAEYEKRYA
VAKELRRGGK RHDSLRYGAR IELGLRTFLE EGSFKGFTTT FEDLHGLRQL PGLAVQRLMA
DGYGFGAEGD WKTAALLRAM KVMGEGLDGG TSFMEDYTYH MNPKGHQVLG AHMLEICSTI
AATKPSLEIH PLGIGGKEDP VRLVFDAPAG PALNASLIDM GNRFRLLVNE VTAVKTPKLP
KLPVARAVWE CQPDFKTACA AWIYAGGAHH TGYSYSVTTE MLEDFANIAG IELAVINADT
KLGEFKQTLR NNEVYYHLAQ GIRV