| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1381 |
|---|
| Symbol | |
|---|
| ID | 6207067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1727242 |
|---|
| End bp | 1727940 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641691023 |
|---|
| Product | class II aldolase/adducin family protein |
|---|
| Protein accession | YP_001818266 |
|---|
| Protein GI | 182413200 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0497618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGAGG ATCTCAAACG TGAAGCCTAC GAGGCCAATC TCGCGCTGCC GCGCGAGGGC
CTGATCAATC TCACCTTCGG CAACGCCAGC GCCATCGATC GCGCGAAAGG CATCTTCGCC
ATCAAGCCCA GCGGCGTCGA CTACGCCGCG CTGAAGCCGG CCGACATGGT GCTCGTCGAT
CTCGACGGCA AGCAGGTCGA AGGCTCGTTG CGGCCGTCGT CCGACACGCC GACGCACCGC
CGGCTTTTCC TCGCGTTTCC GTCGATCGGC GGCGTCGTGC ACACGCACAG CTCGCATGCG
ACCGCGTTCG CGCAGGCCGG CCGCGCCATC CCGATCTTTG GCACCACGCA TGCCGATTAC
TTTTTCGGCG ACATCCCCGT GACGCGGAAG ATGACGCCCG CCGAGATCGG CGGCGGCGCC
TACGAGTGGG AAACCGGCAA CGTGATCGTC GAGCTGTTCA CGCAGCAGAA ACTCGATCCG
CAGGATTTCC CCGCGGTGCT CGTGAACCGC CACGCGCCGT TCACCTGGGG GCACAACGTC
GCCAAAGCCG TCGAGGTGGC CGTCGCCGTC GAGTGCATCG CCGACATGGC GCTGATGTCG
CTGCAGCTGA ATCCGTCGCT CGCGACGATC GAGCCCGAGT TGCTGAACAA GCACTTCAAG
CGCAAGCACG GCCCCGGCGC GTACTACGGA CAAAGGTAG
|
|---|
| Protein sequence | MLEDLKREAY EANLALPREG LINLTFGNAS AIDRAKGIFA IKPSGVDYAA LKPADMVLVD
LDGKQVEGSL RPSSDTPTHR RLFLAFPSIG GVVHTHSSHA TAFAQAGRAI PIFGTTHADY
FFGDIPVTRK MTPAEIGGGA YEWETGNVIV ELFTQQKLDP QDFPAVLVNR HAPFTWGHNV
AKAVEVAVAV ECIADMALMS LQLNPSLATI EPELLNKHFK RKHGPGAYYG QR
|
|---|
| |