Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1366 |
Symbol | |
ID | 6208528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1702021 |
End bp | 1703967 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691007 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_001818251 |
Protein GI | 182413185 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.226192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGCC CCACGTTTCC CCTCCTGGCC AAGCTGCTCG CGTCGACGCT TGCGCTCGGC TTCTGCGCCA GCGCGCTCGG TGCCCAGCCC TCCGCGGCCG CCGAGCTGCC AAACCCACTC ATCCTCCAGC GGGCGGACCC GTACATTCAC CGGCACACCG ACGGATTCTA TTACTTCATC GCGACCGTGC CCGACTACGA CCGGCTCGAG CTGCGGCGCG CCTCAACCGT GGCCGGGCTC GCCACGACCG AACCGAAAAC GATCTGGCGC AAACACGCCG CCGGTCCGCT GAGCGAAAAC ATCTGGGCGC CCGAGATCCA CTTCATCGAC GGTCGCTGGT TCATCTACGT CGCCGCCGGC GAGGTTGGCG TCCGCGGCAG CATCCGGATG TACGTGTTGG AAAACGCCTC CGCCAATCCG CTCGAGGGCG AGTGGATTGA GCACGGGCAG CTCAAGACCC GCTGGGACTC GTTCTCGCTC GATGCAACGA CCTTCGAACA TCGCGGCACG CGCTACCTTG TCTGGGCGCA ACGCGACCCG GCGGTGCAGA ACAACTCCGA CCTCTACCTC GCGAAAATGG ACTCGCCCAC CTCGATCGTC CAACCGCAGG TGCTGCTCTC GCGGCCGGAG TTCGACTGGG AAAAAGTCCG CTACGCGGTC AACGAGGGCC CCGCCGTGCT GATCCGGAAC GGCCGCGTGT TCCTCACCTA CTCCGCCGCC GGCACTGGCG CCGAATACAG CCTGGGCCTG CTCACCGCGC GCGAGGACGC CGATCTGCTC GATCCGAAAT CGTGGACCAA ATCGCCGACG CCCGTGTTCA CGACGAACGA AGCGAACGGG ATTTTCGGGC CCGGCCACAA CAGCTTCACC GTCGCCGAAG ACGGCAAGAC TGACTTGCTC GTCTACCACG CGCGCAACTA CCGCGACATC CCGGGCAATC CGCTGCGCGA CCCAAACCGC CATACCCGCG TGCAGCCGAT TGCCTGGCGC GCGGACGGCA CGCCGGACTT CGGCGTGCCC GCACGTGAAA CCCTGCCGAA GTTCGGCACC GTCAAACGCG CCGATCTTCA CGCCCGCGAC GCATGCGTCT GGCCCGATCC GAAGACGCAG ACGTACACGA TGTACTTCTC GTCGCGCGGA CCGAACCGCC GCGCGGCCGT CTCCGCCTAC ACCAGCAAGA ACCTCGAAGA CTGGACCGGC CCGCATTACG TGTTCGAACG GCCAGCCGAT TGGTGGGCCG ATCGCGGGAT CTGGGCGCCG GAGATGCACG CCTATCGGGG CAAGTCCTAT CTGTTTCTCA CCTTCGATTC CTCCCACAAG TTCCCCGAGC AGTGGCGGGA CTGGCTGCCG CGGGTAAAAC GCGGCTCGCA GGTCCTCGTC GCCGATAACC CGATGGGGCC GTTCCAGCCG TTCGCCAACC GCTCCACGCT GCCCGAGGAC ATGATGACCC TCGACGGCAC GTTGTTCGAG GAAGATGGCG TGCCCTACAT GGTGTTCTGC CACGAGTGGG TGCAGATCAA GGACGGCACG GTGGAAATGA TTCAGCTGAA GGACGACCTC TCCGGCACCG TCGGCGAACC CAAGCGGCTC TTCCACGGCA GCGACGCGCC TTGGGCGCAA AAATCCCCGC AGTATGGCTG CTACGTCACC GACGGTCCGT GGTTCCATCG CACCCAAGGC GGCAAGCTGC TGATGCTCTG GTCGAGCGGT TCGCCGACCG GTTACGCGGT CGGCATCGCG ACGTCCGAAT CCGGCAAGCT CGCCGGCCCG TGGAAACAAT CGCCCGCCGC GCTGTTCGCT GCCGATGGCG GGCATCCGAT GCTGTTTCGC CGATTCGACG GTCAACTGAT GATGGCGCTC CATCAACCGA ACAAACCCGG ACGCGAACGG ATCCAGTTCA TCGAACTCGA TGAACGCGGC GACACGCTCG CGCTGAAAGG CAAATGA
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Protein sequence | MVRPTFPLLA KLLASTLALG FCASALGAQP SAAAELPNPL ILQRADPYIH RHTDGFYYFI ATVPDYDRLE LRRASTVAGL ATTEPKTIWR KHAAGPLSEN IWAPEIHFID GRWFIYVAAG EVGVRGSIRM YVLENASANP LEGEWIEHGQ LKTRWDSFSL DATTFEHRGT RYLVWAQRDP AVQNNSDLYL AKMDSPTSIV QPQVLLSRPE FDWEKVRYAV NEGPAVLIRN GRVFLTYSAA GTGAEYSLGL LTAREDADLL DPKSWTKSPT PVFTTNEANG IFGPGHNSFT VAEDGKTDLL VYHARNYRDI PGNPLRDPNR HTRVQPIAWR ADGTPDFGVP ARETLPKFGT VKRADLHARD ACVWPDPKTQ TYTMYFSSRG PNRRAAVSAY TSKNLEDWTG PHYVFERPAD WWADRGIWAP EMHAYRGKSY LFLTFDSSHK FPEQWRDWLP RVKRGSQVLV ADNPMGPFQP FANRSTLPED MMTLDGTLFE EDGVPYMVFC HEWVQIKDGT VEMIQLKDDL SGTVGEPKRL FHGSDAPWAQ KSPQYGCYVT DGPWFHRTQG GKLLMLWSSG SPTGYAVGIA TSESGKLAGP WKQSPAALFA ADGGHPMLFR RFDGQLMMAL HQPNKPGRER IQFIELDERG DTLALKGK
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