Gene Oter_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1366 
Symbol 
ID6208528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1702021 
End bp1703967 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content65% 
IMG OID641691007 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_001818251 
Protein GI182413185 
COG category[R] General function prediction only 
COG ID[COG3940] Predicted beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.226192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCC CCACGTTTCC CCTCCTGGCC AAGCTGCTCG CGTCGACGCT TGCGCTCGGC 
TTCTGCGCCA GCGCGCTCGG TGCCCAGCCC TCCGCGGCCG CCGAGCTGCC AAACCCACTC
ATCCTCCAGC GGGCGGACCC GTACATTCAC CGGCACACCG ACGGATTCTA TTACTTCATC
GCGACCGTGC CCGACTACGA CCGGCTCGAG CTGCGGCGCG CCTCAACCGT GGCCGGGCTC
GCCACGACCG AACCGAAAAC GATCTGGCGC AAACACGCCG CCGGTCCGCT GAGCGAAAAC
ATCTGGGCGC CCGAGATCCA CTTCATCGAC GGTCGCTGGT TCATCTACGT CGCCGCCGGC
GAGGTTGGCG TCCGCGGCAG CATCCGGATG TACGTGTTGG AAAACGCCTC CGCCAATCCG
CTCGAGGGCG AGTGGATTGA GCACGGGCAG CTCAAGACCC GCTGGGACTC GTTCTCGCTC
GATGCAACGA CCTTCGAACA TCGCGGCACG CGCTACCTTG TCTGGGCGCA ACGCGACCCG
GCGGTGCAGA ACAACTCCGA CCTCTACCTC GCGAAAATGG ACTCGCCCAC CTCGATCGTC
CAACCGCAGG TGCTGCTCTC GCGGCCGGAG TTCGACTGGG AAAAAGTCCG CTACGCGGTC
AACGAGGGCC CCGCCGTGCT GATCCGGAAC GGCCGCGTGT TCCTCACCTA CTCCGCCGCC
GGCACTGGCG CCGAATACAG CCTGGGCCTG CTCACCGCGC GCGAGGACGC CGATCTGCTC
GATCCGAAAT CGTGGACCAA ATCGCCGACG CCCGTGTTCA CGACGAACGA AGCGAACGGG
ATTTTCGGGC CCGGCCACAA CAGCTTCACC GTCGCCGAAG ACGGCAAGAC TGACTTGCTC
GTCTACCACG CGCGCAACTA CCGCGACATC CCGGGCAATC CGCTGCGCGA CCCAAACCGC
CATACCCGCG TGCAGCCGAT TGCCTGGCGC GCGGACGGCA CGCCGGACTT CGGCGTGCCC
GCACGTGAAA CCCTGCCGAA GTTCGGCACC GTCAAACGCG CCGATCTTCA CGCCCGCGAC
GCATGCGTCT GGCCCGATCC GAAGACGCAG ACGTACACGA TGTACTTCTC GTCGCGCGGA
CCGAACCGCC GCGCGGCCGT CTCCGCCTAC ACCAGCAAGA ACCTCGAAGA CTGGACCGGC
CCGCATTACG TGTTCGAACG GCCAGCCGAT TGGTGGGCCG ATCGCGGGAT CTGGGCGCCG
GAGATGCACG CCTATCGGGG CAAGTCCTAT CTGTTTCTCA CCTTCGATTC CTCCCACAAG
TTCCCCGAGC AGTGGCGGGA CTGGCTGCCG CGGGTAAAAC GCGGCTCGCA GGTCCTCGTC
GCCGATAACC CGATGGGGCC GTTCCAGCCG TTCGCCAACC GCTCCACGCT GCCCGAGGAC
ATGATGACCC TCGACGGCAC GTTGTTCGAG GAAGATGGCG TGCCCTACAT GGTGTTCTGC
CACGAGTGGG TGCAGATCAA GGACGGCACG GTGGAAATGA TTCAGCTGAA GGACGACCTC
TCCGGCACCG TCGGCGAACC CAAGCGGCTC TTCCACGGCA GCGACGCGCC TTGGGCGCAA
AAATCCCCGC AGTATGGCTG CTACGTCACC GACGGTCCGT GGTTCCATCG CACCCAAGGC
GGCAAGCTGC TGATGCTCTG GTCGAGCGGT TCGCCGACCG GTTACGCGGT CGGCATCGCG
ACGTCCGAAT CCGGCAAGCT CGCCGGCCCG TGGAAACAAT CGCCCGCCGC GCTGTTCGCT
GCCGATGGCG GGCATCCGAT GCTGTTTCGC CGATTCGACG GTCAACTGAT GATGGCGCTC
CATCAACCGA ACAAACCCGG ACGCGAACGG ATCCAGTTCA TCGAACTCGA TGAACGCGGC
GACACGCTCG CGCTGAAAGG CAAATGA
 
Protein sequence
MVRPTFPLLA KLLASTLALG FCASALGAQP SAAAELPNPL ILQRADPYIH RHTDGFYYFI 
ATVPDYDRLE LRRASTVAGL ATTEPKTIWR KHAAGPLSEN IWAPEIHFID GRWFIYVAAG
EVGVRGSIRM YVLENASANP LEGEWIEHGQ LKTRWDSFSL DATTFEHRGT RYLVWAQRDP
AVQNNSDLYL AKMDSPTSIV QPQVLLSRPE FDWEKVRYAV NEGPAVLIRN GRVFLTYSAA
GTGAEYSLGL LTAREDADLL DPKSWTKSPT PVFTTNEANG IFGPGHNSFT VAEDGKTDLL
VYHARNYRDI PGNPLRDPNR HTRVQPIAWR ADGTPDFGVP ARETLPKFGT VKRADLHARD
ACVWPDPKTQ TYTMYFSSRG PNRRAAVSAY TSKNLEDWTG PHYVFERPAD WWADRGIWAP
EMHAYRGKSY LFLTFDSSHK FPEQWRDWLP RVKRGSQVLV ADNPMGPFQP FANRSTLPED
MMTLDGTLFE EDGVPYMVFC HEWVQIKDGT VEMIQLKDDL SGTVGEPKRL FHGSDAPWAQ
KSPQYGCYVT DGPWFHRTQG GKLLMLWSSG SPTGYAVGIA TSESGKLAGP WKQSPAALFA
ADGGHPMLFR RFDGQLMMAL HQPNKPGRER IQFIELDERG DTLALKGK