| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1325 |
|---|
| Symbol | |
|---|
| ID | 6206670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1632304 |
|---|
| End bp | 1633401 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690966 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001818210 |
|---|
| Protein GI | 182413144 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.322233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG AAGTCACAGA TTCATCCCAT CCCGCGCGCT GGTGGATCCA GCGCGACGAC
GGCCGGGTCG AATGCCGGCT GTGCCCACGG TTCTGCAAAC TTCACGACGG CCAGCAGGGC
TTCTGCTTTG TCCGGCGCCG CGTCGGCGAA CGGATCGAAC TCACGACTTA CGGTCGCAGC
AGCGGCTTCT GCATCGATCC GATCGAGAAG AAACCGCTGA ACCACTTCCT GCCCGGCAGC
AGCGTGCTCT CGTTTGGCAC CGCCGGCTGC AATCTCGGTT GCCGGTTCTG CCAGAACTGG
GACATCAGCA AGGCGCGCGA ATACGATCGG CTCGGTGATG CCGCGTCGCC GGAGCAACTC
GCAGCCACGG CGCAACGGCT GGGCTGTCGC TCCGTCGCTT TCACCTACAA CGATCCGGTG
ATCTTCGCCG AATACGCGAT CGACATCGCG CGCGCCTGCC GCACGCGCGG CATCAAAACC
GTCGCTGTCA CCGCCGGCTA CATCGGCGCG GATGCGCGGC CAGAGTTCTT CGCGGCGATG
GACGCCGCCA ACGTCGATCT CAAGGGGTTC TCCGAAGATT TCTATCACCG GCTCTGCTTC
GCGCAGCTGC AGCCGGTCCT CGACACGCTG GTCTATTTGC ATCGCGAGAC GTCTGTTTGG
CTCGAGGTGA CGACGCTGCT GATCCCGGGC GAAAACGACA GCGACGCGGA ACTCGACCGC
GCATCCGACT GGTTAGCCGC CAACCTTGGG TCCGACGTGC CGTGGCACTT CACCGCGTTT
CATCCTGATT TCAAAATGCT CGCCACGCCG CCGACGCCGG TGACCACGCT GCGTCGCGCC
CGCGAGATCG CGCGTTCGAA AGGACTCCAT CACGTCTACA CCGGCAACGT GCGCGATCGC
GACGGAGGCA CGACGTGGTG CCCGGGCTGC GGCGCCGCGC TGATCGAGCG CGACGGCTAC
GAGCTGCGCC GCTACGCGCT GGACGAAAAC CGCTGCCGCG CTTGTGGCTG CGCGCTCGCC
GGAGTTTTCG AGGCCCAGCC CGGCACGTGG GGCAACCGTC GGCAGCCGGT CCGGCTGAGC
CGTGGCCGCA CCGCCTAG
|
|---|
| Protein sequence | MTAEVTDSSH PARWWIQRDD GRVECRLCPR FCKLHDGQQG FCFVRRRVGE RIELTTYGRS
SGFCIDPIEK KPLNHFLPGS SVLSFGTAGC NLGCRFCQNW DISKAREYDR LGDAASPEQL
AATAQRLGCR SVAFTYNDPV IFAEYAIDIA RACRTRGIKT VAVTAGYIGA DARPEFFAAM
DAANVDLKGF SEDFYHRLCF AQLQPVLDTL VYLHRETSVW LEVTTLLIPG ENDSDAELDR
ASDWLAANLG SDVPWHFTAF HPDFKMLATP PTPVTTLRRA REIARSKGLH HVYTGNVRDR
DGGTTWCPGC GAALIERDGY ELRRYALDEN RCRACGCALA GVFEAQPGTW GNRRQPVRLS
RGRTA
|
|---|
| |