Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1269 |
Symbol | |
ID | 6205684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1571423 |
End bp | 1572820 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641690910 |
Product | sugar (glycoside-Pentoside-hexuronide) transporter |
Protein accession | YP_001818154 |
Protein GI | 182413088 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.727469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGC CTGTTTCCAC TCCCGCGCCG GTGCCGCGTC TCAGCTTCCG GGAAAAATTC GCCTACGGCT TGGGCGACAC CGCATCGAAT TTCTATTTCC AGGCGTTCAA TCTCTTCCTG GTCTACTACT ACACCGACAT CTTCGGGTTG CAGTCGACTT CGGTGGGCAC GCTGATGTTC ATCACGCCGA TCCTGGTGGC GGTGTTGAAC CCGGTGATCG GTGCGATCGC GGACCGCACG AACAGCCGCT GGGGCAAGTT CCGGCCCTAC ATCCTGTGGG GCGCGATTCC GTATGGACTG CTGGGCGTGC TGATGTTCGC GAATCCGAAC CTCAGCACCG ACGGCAAACT GATCTACGCC TACGTCACCT ACACGCTCGT GCTGATCACC TATGCCGCGA TCAACACGCC CTACGGCGCG CTCATGGGCG TGATGTCGCC GTCGTCGGAG GATCGCACCT CGCTTTCGAC GTATCGCTTC GCGTGCGCGT TCACCGGCGC GCTGCTCATC GGCTGGCTCG TGCCGTGGTT GAAGGACGCG CTCACCGGCG TGACGGGCAA CCCGGCGATC GGATTTCGGA ACACCATGTG GATCTTCGCC GCCGTGTCGG TGGGCATGTT CTTCTACACC TTCGCCAACA CGCGGGAGCG CGTCGCCCCG CCGCCCACGC AGAAATCCTC GTTGCGCGAG GACATCGGCG ACCTGATGCG CAATCCGCCC TGGTTGATCC TTTTCTTCGT CGCGTTCCTC AACCTCACCA ACGTCGGGAT GCGCAGCGGC TCGGGTATCT ACTACTTCAA GTATTGCGTC GGCAACGAGG CCGCGCTCGG CACCTTCAAT CTCGTCGGGT TCCTCTGCTT CATCGCCGGC GCGCTCTCGA CCAAGCTCCT GCTGCGTCTG TTGCCGCGGC GCGGGTTGAT GATCACATGC ACGGTCGTGA ACGCGCTCAC CATGGCAGCG TTCTACTTCG TCGATCCGCA TTCGACCGTG TTGCTCTACG TGCTGAACAT CGTCGGGCAG TTCGTGGCCG GGCCCACGCC CGCCATCGTG TGGTCGATGT ATGCGGACAC GGCCGACTAC GGCGAGTGGA AGAACGGTCG CCGCGCCACC GGGCTCGTGT TCTCCGCCAC CGTGTTCGCG CAGAAAGTCG GCCTCGCGAT CGGTTCGGCG ATGCTGGGCT GGATGCTCAG CTACTACGGT TTCGTGGCCA ACGCGGCGCA ATCCCCGCGC GCGATCCACG GCATCACGAT CCTGTTCAGC CTGCTGCCGG CGCTCTTCGG CGGACTGAGC GGACTGGCGA TCCTGTTCTA TAAAATCGAC GAGCCGCTCG TGAAACAGAT CGAGCGCGAC CTCGCCGCGC GGAAAGCCGC GCCGGCGACC GCGGTCTCCA CCTCCTAG
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Protein sequence | MNPPVSTPAP VPRLSFREKF AYGLGDTASN FYFQAFNLFL VYYYTDIFGL QSTSVGTLMF ITPILVAVLN PVIGAIADRT NSRWGKFRPY ILWGAIPYGL LGVLMFANPN LSTDGKLIYA YVTYTLVLIT YAAINTPYGA LMGVMSPSSE DRTSLSTYRF ACAFTGALLI GWLVPWLKDA LTGVTGNPAI GFRNTMWIFA AVSVGMFFYT FANTRERVAP PPTQKSSLRE DIGDLMRNPP WLILFFVAFL NLTNVGMRSG SGIYYFKYCV GNEAALGTFN LVGFLCFIAG ALSTKLLLRL LPRRGLMITC TVVNALTMAA FYFVDPHSTV LLYVLNIVGQ FVAGPTPAIV WSMYADTADY GEWKNGRRAT GLVFSATVFA QKVGLAIGSA MLGWMLSYYG FVANAAQSPR AIHGITILFS LLPALFGGLS GLAILFYKID EPLVKQIERD LAARKAAPAT AVSTS
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