Gene Oter_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1269 
Symbol 
ID6205684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1571423 
End bp1572820 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content63% 
IMG OID641690910 
Productsugar (glycoside-Pentoside-hexuronide) transporter 
Protein accessionYP_001818154 
Protein GI182413088 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID[TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.727469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC CTGTTTCCAC TCCCGCGCCG GTGCCGCGTC TCAGCTTCCG GGAAAAATTC 
GCCTACGGCT TGGGCGACAC CGCATCGAAT TTCTATTTCC AGGCGTTCAA TCTCTTCCTG
GTCTACTACT ACACCGACAT CTTCGGGTTG CAGTCGACTT CGGTGGGCAC GCTGATGTTC
ATCACGCCGA TCCTGGTGGC GGTGTTGAAC CCGGTGATCG GTGCGATCGC GGACCGCACG
AACAGCCGCT GGGGCAAGTT CCGGCCCTAC ATCCTGTGGG GCGCGATTCC GTATGGACTG
CTGGGCGTGC TGATGTTCGC GAATCCGAAC CTCAGCACCG ACGGCAAACT GATCTACGCC
TACGTCACCT ACACGCTCGT GCTGATCACC TATGCCGCGA TCAACACGCC CTACGGCGCG
CTCATGGGCG TGATGTCGCC GTCGTCGGAG GATCGCACCT CGCTTTCGAC GTATCGCTTC
GCGTGCGCGT TCACCGGCGC GCTGCTCATC GGCTGGCTCG TGCCGTGGTT GAAGGACGCG
CTCACCGGCG TGACGGGCAA CCCGGCGATC GGATTTCGGA ACACCATGTG GATCTTCGCC
GCCGTGTCGG TGGGCATGTT CTTCTACACC TTCGCCAACA CGCGGGAGCG CGTCGCCCCG
CCGCCCACGC AGAAATCCTC GTTGCGCGAG GACATCGGCG ACCTGATGCG CAATCCGCCC
TGGTTGATCC TTTTCTTCGT CGCGTTCCTC AACCTCACCA ACGTCGGGAT GCGCAGCGGC
TCGGGTATCT ACTACTTCAA GTATTGCGTC GGCAACGAGG CCGCGCTCGG CACCTTCAAT
CTCGTCGGGT TCCTCTGCTT CATCGCCGGC GCGCTCTCGA CCAAGCTCCT GCTGCGTCTG
TTGCCGCGGC GCGGGTTGAT GATCACATGC ACGGTCGTGA ACGCGCTCAC CATGGCAGCG
TTCTACTTCG TCGATCCGCA TTCGACCGTG TTGCTCTACG TGCTGAACAT CGTCGGGCAG
TTCGTGGCCG GGCCCACGCC CGCCATCGTG TGGTCGATGT ATGCGGACAC GGCCGACTAC
GGCGAGTGGA AGAACGGTCG CCGCGCCACC GGGCTCGTGT TCTCCGCCAC CGTGTTCGCG
CAGAAAGTCG GCCTCGCGAT CGGTTCGGCG ATGCTGGGCT GGATGCTCAG CTACTACGGT
TTCGTGGCCA ACGCGGCGCA ATCCCCGCGC GCGATCCACG GCATCACGAT CCTGTTCAGC
CTGCTGCCGG CGCTCTTCGG CGGACTGAGC GGACTGGCGA TCCTGTTCTA TAAAATCGAC
GAGCCGCTCG TGAAACAGAT CGAGCGCGAC CTCGCCGCGC GGAAAGCCGC GCCGGCGACC
GCGGTCTCCA CCTCCTAG
 
Protein sequence
MNPPVSTPAP VPRLSFREKF AYGLGDTASN FYFQAFNLFL VYYYTDIFGL QSTSVGTLMF 
ITPILVAVLN PVIGAIADRT NSRWGKFRPY ILWGAIPYGL LGVLMFANPN LSTDGKLIYA
YVTYTLVLIT YAAINTPYGA LMGVMSPSSE DRTSLSTYRF ACAFTGALLI GWLVPWLKDA
LTGVTGNPAI GFRNTMWIFA AVSVGMFFYT FANTRERVAP PPTQKSSLRE DIGDLMRNPP
WLILFFVAFL NLTNVGMRSG SGIYYFKYCV GNEAALGTFN LVGFLCFIAG ALSTKLLLRL
LPRRGLMITC TVVNALTMAA FYFVDPHSTV LLYVLNIVGQ FVAGPTPAIV WSMYADTADY
GEWKNGRRAT GLVFSATVFA QKVGLAIGSA MLGWMLSYYG FVANAAQSPR AIHGITILFS
LLPALFGGLS GLAILFYKID EPLVKQIERD LAARKAAPAT AVSTS