Gene Oter_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1238 
Symbol 
ID6206623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1532265 
End bp1533398 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID641690879 
Producthistidine kinase 
Protein accessionYP_001818123 
Protein GI182413057 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0477765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTC AAAAGACACG GAAACTTTCA CGCTACCTGG CGGCGCTGCG CAGCCATCTG 
CGGCGCCGTC ATGCGCGCAG GGGAAGGCCG ACGCCTGGGA TTGGCCGCGA GTTCGCGAGC
GCGGGCTTGA AGGCGCTCGA CTTGGCCAGA ATGCACGAAG CGTCGCTGAT GGCGCTGGCG
GCGACGCATG ATTTCGGCGA CAGCCGCAAC GGCTTGATGA AGCGGGCCGG GAATTTCTTT
GCCGACGCGC TGCTCCCGAT CATGGACCAG CATCGCGGTA CCGGGGCTTC CTTCCAGCGC
CTGCAGCAGC GCGCCGAGAC CCTGCGCCTG CACGCGGCCG CGCTCGCCGA AGGCAATCGC
CAGCTGAACC GCGAAGTGAA GCGCCGCAAA GCCGGGGAGG CCGCGGTTGA AAAGGCCAAG
GAGCACTACC GTTGCCTCTT CCTGGAATCG GAGGTCATGC AGAAGAAGCT CCAGCGCCTG
ACTCGCCAGA TACTATCCGC GCAGGAAGAC GAACGCCGCG AGATCAGTCG GGAGCTGCAT
GGCGAGGTGG TCCAGACGCT GGTGGGGATA AACGTTCAGC TGGCGACCCT GGGCAAGGCG
GCTTCGCTCG GCATCCGGGG CTTGAAGGCG AAGATCGATC TGACGCAACG GCTGGTGGCA
AGATCCGTCA ACGCCGTGCA CCAGTTCGCG CGCGAGTTGC GCCCCGCCGT ACTCGATGAT
CTCGGGCTCA TTCCGGCGCT GCACGCGTCC ATGAAGACCA TGGCCGCACG GAGGAATCTG
AAGGTCCGGC TGACGGCGTC GGCGGCGGTG GAGGCGCTGG ACGCGCCGCT GCGCACGGTG
CTGTACCGCG TGGCGCAGGA GGCGCTCACC AATGTCACGC GGCACGCGCG GGCCCGCCAT
GTCGACCTGA CCATCGTCGA GGTGGCCGGT GGCATCCGCC TGGACGTGCA CGACGACGGA
AAAGGCTTCG CGGTGCAGAA GACTCTGTCG TCCCGTGCGA ACCGGCGGCT GGGGTTGCTG
GGCATGAGAG AGCGGGTGGA AATGGTAGGC GGAACGCTCA CGATCGAATC CTCCCCCGGC
CGCGGTACGA CCGTGCGCGC GGAGGTGCCG TTCAACCCGA AGGAGGGCGC ATGA
 
Protein sequence
MNTQKTRKLS RYLAALRSHL RRRHARRGRP TPGIGREFAS AGLKALDLAR MHEASLMALA 
ATHDFGDSRN GLMKRAGNFF ADALLPIMDQ HRGTGASFQR LQQRAETLRL HAAALAEGNR
QLNREVKRRK AGEAAVEKAK EHYRCLFLES EVMQKKLQRL TRQILSAQED ERREISRELH
GEVVQTLVGI NVQLATLGKA ASLGIRGLKA KIDLTQRLVA RSVNAVHQFA RELRPAVLDD
LGLIPALHAS MKTMAARRNL KVRLTASAAV EALDAPLRTV LYRVAQEALT NVTRHARARH
VDLTIVEVAG GIRLDVHDDG KGFAVQKTLS SRANRRLGLL GMRERVEMVG GTLTIESSPG
RGTTVRAEVP FNPKEGA