Gene Oter_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1078 
Symbol 
ID6205386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1337150 
End bp1338151 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID641690721 
Productrestriction endonuclease 
Protein accessionYP_001817966 
Protein GI182412900 
COG category[S] Function unknown 
COG ID[COG4127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.272779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA ATGCCTGGAT GATCCGCGCG GGCGAAGGCG GATACTTGAT CGAGGAGTTC 
GCCAAAGGCT TGGTCACCGT CGGCTGGCAT GAGGTCGGCG AAATCAAAGA CACGTCGCAG
CGCGACCTCT GGCTCCGGCT CGCGACCGTC TACCCCGGAT CGAAACCAGC GACGAACCAG
AATGCCGCGT CGGTTCTGTG GCGATTTGCT CGGGTCGTTA AAGTTGGCGA CGCCGTCGTG
ACCTACGATC CGACCAAACG GGAGTACCTA CTCGGCGTGG TAACGAGCGA CTACGGCTAC
GAGCCGAAAC GATCTAAAGA GCATCCTCAC ACACGCGAGG TGACATGGGA AGCCCGGGTC
TCGCGTGACG CGTTGAGCGT GGCGACCCGC AATTCGCTCG GAAGCACGCT GGCGTTGTTT
GCAGTCCCGG ACGCGGCATT CACTGAGCTG CAGGCGGCAT CGGAGTCAAA GAAGACGGCC
GAACCCACCA GCGGAATCGA AGACCGCAAG GAGCAACTGG TTCAATCCAA CCGCGACGCC
GAAGAGCAAT CGCGTGAACT CATCGAAGAC CGGATCCTCG CGCTCGATCC TTTCGAGATG
CAGGAGCTGA TTGCGGCGGT GCTGCGGGCG ATGGGCTATC GCACGCGCGT TTCGCCACCG
GGCTCAGATC GGGGCATCGA CGTGCTGGCG TCGCCGGATG GGCTCGGGCT CCAAGAACCA
CGAATCAAAG TCGAGGTGAA GCACCGGCCG GGCACCGCGA TGGGCTCACA GGAAGTTCGC
AGTTTCATCG GCAGCCTGCG CTCAGGGGAT CGCGGGCTCT ACGTCAGTAC CGGCGCGTTC
TCGAAAGAAG CGAAATACGA GGCCGAACGC GCTACGATTC CCGTCACGCT CATTGACCTG
CGTGATCTCG CGCAGCTCGT CACAGATAAC TACGAGAATT TCGACACCAA GGGTCGCGCA
CTCCTCCCGC TCGTCAGAAT CTATCGCCCT GCCGCAGAAT AG
 
Protein sequence
MSKNAWMIRA GEGGYLIEEF AKGLVTVGWH EVGEIKDTSQ RDLWLRLATV YPGSKPATNQ 
NAASVLWRFA RVVKVGDAVV TYDPTKREYL LGVVTSDYGY EPKRSKEHPH TREVTWEARV
SRDALSVATR NSLGSTLALF AVPDAAFTEL QAASESKKTA EPTSGIEDRK EQLVQSNRDA
EEQSRELIED RILALDPFEM QELIAAVLRA MGYRTRVSPP GSDRGIDVLA SPDGLGLQEP
RIKVEVKHRP GTAMGSQEVR SFIGSLRSGD RGLYVSTGAF SKEAKYEAER ATIPVTLIDL
RDLAQLVTDN YENFDTKGRA LLPLVRIYRP AAE