Gene Oter_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0961 
Symbol 
ID6205725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1178118 
End bp1179332 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content68% 
IMG OID641690584 
Productthreonine dehydratase 
Protein accessionYP_001817849 
Protein GI182412783 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01127] threonine dehydratase, medium form 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.569986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTA CCCTGACCGA TATTCGCGCG GCGCAGCGGC GGATTGCGGA CGGCGTGATT 
GTTTCGCCGT GCCCGGAATC GATTCCGCTC TCCGAGATCA CCGGCGCGCG CATCGTCTGC
AAACTCGACA ACTTCCAGCG CACCGGCTCG TTCAAGGAAC GCGGCGCGCG CAATGCGCTG
AAGCTGCTCT CGCCGACCGC CCGGCAGCGC GGCGTGGTCG CGGCCAGCGC GGGCAATCAC
GCGCTCGGGC TCGCCTACCA CGGTCGGCTG CTCGGAATTC CTGTGACGGT GGTGATGCCG
GACTACGCGC CATTGATCAA GGTCACCACC TGCCAGCGAC TCGGGGCCCG CGTGTTGATT
CGCGGCGTGG ATTTCGCGGA GGCGCGCGCT GCGGCCGACG ACCTCGTCGT CCAGGAGGGC
CTGACGTATA TCCACGGTTT CGATGCTCCG GCGATCATCG CCGGCCAGGG CACGATCGGA
CTCGAGATCC TGCGGCAGGT GCCCGACGTG GAGGCAATTT TGTGTCCGGT GGGCGGAGGC
GGGTTGATCG CGGGGCTGGC GACCGCGGTG AAATCGCTCC GGCCGCGCGT GAAGATCGTC
GGCGTCGAGA GCGTCTCAAC CCGCAATCTG AGCGCGGCGC TCAAGGCGGG CAAGCCCACG
CTCCAGCCGC GGCAGCACAC GCTCGCCGAC GGTTTGGCCA CGCTCACGGT CGGAGCCGAA
GCCTTCGCCC TCGCGCGTGA CCGGGTCGAC GAAGTGGTGC AGGTCAAGGA AGAGTGGATC
GCGCTCGCGA TCCTGCGGAT GATCGAGCTG GAGAAGACGG TCGTCGAAGG CGCGGGAGCG
GTGCCGCTCG CCGCGATGAT GGCGGGGTTG TTGCCCAAAC TTCGCGGTCG CAAGGTCGCG
CTGGTCGTGG GCGGCGGCAA CATCGACCCG GCAGTGCTGA GTCGCGTCAT CGAAATCGGC
TTGGTGCACG ATGGCCGGCT CACGCGTTTC GCAGCGGTGA TCAGCGATCG GCCCGGCGGG
TTGGCCGAAT TGAGCCGGGT GATCGCCTCG GCCGGCGCGA GCATCAAGGA CATCGCCCAC
GACCGCGCCT TCAGCGGACC GGACGTGAGC GCGGTCCGCG CGGTGTGTAC GGTGGAAACG
CGCGATCGGG CCCACATCAC GACACTGCAC CGGGCACTGC GGAAGCATGG CTTCTCGCTG
GAAATTTCTC GGTAA
 
Protein sequence
MPVTLTDIRA AQRRIADGVI VSPCPESIPL SEITGARIVC KLDNFQRTGS FKERGARNAL 
KLLSPTARQR GVVAASAGNH ALGLAYHGRL LGIPVTVVMP DYAPLIKVTT CQRLGARVLI
RGVDFAEARA AADDLVVQEG LTYIHGFDAP AIIAGQGTIG LEILRQVPDV EAILCPVGGG
GLIAGLATAV KSLRPRVKIV GVESVSTRNL SAALKAGKPT LQPRQHTLAD GLATLTVGAE
AFALARDRVD EVVQVKEEWI ALAILRMIEL EKTVVEGAGA VPLAAMMAGL LPKLRGRKVA
LVVGGGNIDP AVLSRVIEIG LVHDGRLTRF AAVISDRPGG LAELSRVIAS AGASIKDIAH
DRAFSGPDVS AVRAVCTVET RDRAHITTLH RALRKHGFSL EISR