Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0961 |
Symbol | |
ID | 6205725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1178118 |
End bp | 1179332 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690584 |
Product | threonine dehydratase |
Protein accession | YP_001817849 |
Protein GI | 182412783 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.569986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTTA CCCTGACCGA TATTCGCGCG GCGCAGCGGC GGATTGCGGA CGGCGTGATT GTTTCGCCGT GCCCGGAATC GATTCCGCTC TCCGAGATCA CCGGCGCGCG CATCGTCTGC AAACTCGACA ACTTCCAGCG CACCGGCTCG TTCAAGGAAC GCGGCGCGCG CAATGCGCTG AAGCTGCTCT CGCCGACCGC CCGGCAGCGC GGCGTGGTCG CGGCCAGCGC GGGCAATCAC GCGCTCGGGC TCGCCTACCA CGGTCGGCTG CTCGGAATTC CTGTGACGGT GGTGATGCCG GACTACGCGC CATTGATCAA GGTCACCACC TGCCAGCGAC TCGGGGCCCG CGTGTTGATT CGCGGCGTGG ATTTCGCGGA GGCGCGCGCT GCGGCCGACG ACCTCGTCGT CCAGGAGGGC CTGACGTATA TCCACGGTTT CGATGCTCCG GCGATCATCG CCGGCCAGGG CACGATCGGA CTCGAGATCC TGCGGCAGGT GCCCGACGTG GAGGCAATTT TGTGTCCGGT GGGCGGAGGC GGGTTGATCG CGGGGCTGGC GACCGCGGTG AAATCGCTCC GGCCGCGCGT GAAGATCGTC GGCGTCGAGA GCGTCTCAAC CCGCAATCTG AGCGCGGCGC TCAAGGCGGG CAAGCCCACG CTCCAGCCGC GGCAGCACAC GCTCGCCGAC GGTTTGGCCA CGCTCACGGT CGGAGCCGAA GCCTTCGCCC TCGCGCGTGA CCGGGTCGAC GAAGTGGTGC AGGTCAAGGA AGAGTGGATC GCGCTCGCGA TCCTGCGGAT GATCGAGCTG GAGAAGACGG TCGTCGAAGG CGCGGGAGCG GTGCCGCTCG CCGCGATGAT GGCGGGGTTG TTGCCCAAAC TTCGCGGTCG CAAGGTCGCG CTGGTCGTGG GCGGCGGCAA CATCGACCCG GCAGTGCTGA GTCGCGTCAT CGAAATCGGC TTGGTGCACG ATGGCCGGCT CACGCGTTTC GCAGCGGTGA TCAGCGATCG GCCCGGCGGG TTGGCCGAAT TGAGCCGGGT GATCGCCTCG GCCGGCGCGA GCATCAAGGA CATCGCCCAC GACCGCGCCT TCAGCGGACC GGACGTGAGC GCGGTCCGCG CGGTGTGTAC GGTGGAAACG CGCGATCGGG CCCACATCAC GACACTGCAC CGGGCACTGC GGAAGCATGG CTTCTCGCTG GAAATTTCTC GGTAA
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Protein sequence | MPVTLTDIRA AQRRIADGVI VSPCPESIPL SEITGARIVC KLDNFQRTGS FKERGARNAL KLLSPTARQR GVVAASAGNH ALGLAYHGRL LGIPVTVVMP DYAPLIKVTT CQRLGARVLI RGVDFAEARA AADDLVVQEG LTYIHGFDAP AIIAGQGTIG LEILRQVPDV EAILCPVGGG GLIAGLATAV KSLRPRVKIV GVESVSTRNL SAALKAGKPT LQPRQHTLAD GLATLTVGAE AFALARDRVD EVVQVKEEWI ALAILRMIEL EKTVVEGAGA VPLAAMMAGL LPKLRGRKVA LVVGGGNIDP AVLSRVIEIG LVHDGRLTRF AAVISDRPGG LAELSRVIAS AGASIKDIAH DRAFSGPDVS AVRAVCTVET RDRAHITTLH RALRKHGFSL EISR
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