| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0916 |
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| Symbol | |
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| ID | 6206162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1127505 |
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| End bp | 1128512 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641690539 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001817804 |
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| Protein GI | 182412738 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA CCTTGCTGCC TAAAGACCGC CGGCGCTCCC CCGCGCTCGT GCTGCTCGCC
GCGCTGCTCG TCGCCCTCGC CGGATGCGCG CGCGGCGGCG GCTCGTCGAA CGACGCGCTC
GTCCTCTCCG GCAACATCGA GGTGGTCGAC GCCCAGCTCG GGTTCAAGGT ACCGGGCCGC
GTGGTGGCGC GCACCGTCGA CGAAGGCGCG CGCGTCACCG CCGGCCAGCT GATTGCGCGG
CTGGATGACG CCGAGCAAAC GCAGGAGCTC GCGCTCCGGC GGGCGGAACT CGCCGCGGTC
GAAGCCGTGC TCGCCGAACT CGAGGCCGGC TCGCGCCCGC AGGAGATCGC CGCGGCGTTA
GCCGGGCTGC ACAGCGCCGA GGCGGAACGC GATCGCGCGC GGCTTGATTT CACGCGCGCG
CAGGAACTGC GCGCCCGCGA CGTGATCGCT GATCGCGACT TCGAGACCGC GCAGGCGCTC
CTCAAGGTCG CCGAGGCGCG CGCGGCCGAA GCGGGCGAAC GGCTCGCGCT GCTCCAAGCG
GGGCCGCGCA CCGAAACGAT TCAGCAGGCC CGCGCCCGCA CGGAACAGGC CCGCGCCGCC
GTCGCACTCG CGGAAACCCG GCTCGCAAAT ACGCAGCTGC TCTCACCGCT CACCGGCCAG
GTGCTGTCGC ACAACATCGA GCCCGGCGAA TTCGTGGCCG CCGGCACGCC GGTCGTGACG
GTCGCCGACC TCGCACACGT CTGGGTGCGC GCCTACGTGA ATCAAACCGA TCTCGGCCAC
GTGAAGCTGG GCCAGAAGGT CGCCGTGCGC ACCGACACGT TTCCCGACAA AACCTACGAA
GGCACCGTCG GCTTCATCTC ATCCGAGGCG GAGTTTACGC CGAAAACCGT GCAGACGCCG
AAGGAACGCG TGAAACTCGT GTTCCGCATC AAAGTCGACG TCGCGAATCC CAACGACGAG
CTGAAGTCCG GCATGCCCGC CGACGTGACG ATCGGCGTCG CTTCATGA
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| Protein sequence | MKSTLLPKDR RRSPALVLLA ALLVALAGCA RGGGSSNDAL VLSGNIEVVD AQLGFKVPGR
VVARTVDEGA RVTAGQLIAR LDDAEQTQEL ALRRAELAAV EAVLAELEAG SRPQEIAAAL
AGLHSAEAER DRARLDFTRA QELRARDVIA DRDFETAQAL LKVAEARAAE AGERLALLQA
GPRTETIQQA RARTEQARAA VALAETRLAN TQLLSPLTGQ VLSHNIEPGE FVAAGTPVVT
VADLAHVWVR AYVNQTDLGH VKLGQKVAVR TDTFPDKTYE GTVGFISSEA EFTPKTVQTP
KERVKLVFRI KVDVANPNDE LKSGMPADVT IGVAS
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