Gene Oter_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0909 
Symbol 
ID6208480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1117350 
End bp1119980 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content67% 
IMG OID641690532 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001817797 
Protein GI182412731 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.138917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.894742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCC TGCTCCAACG CAAGGCTGTG CTCGCGTTTG CGAGTGCGGT CATTTTCGCC 
GCCGGCATCG GCGCCGGCTA CTGGCGATAC CTTCGTGCGC GCGCGGAGCT GTTGGCCGAG
CTCACGGCGC GCGTCCAGGG CTGCGCGGTG GCGTTTCACG TCGCGGAGCT CCAGGAACTC
ACCGGCGCCC CCGCCGAGCG GGAATCTCCC GTCTACGCCA GCGTGAAGGA TCGCCTCGGT
CGCCTGCGGA CGAGCGATGA ACGGCAGCCG CGCATCTCCC TGTTGCGCTA TCTTCCGGCC
AACGGCACGT TGCTGCCCCT GGCCGATTCG GCGCCGCGAA CCGATCCCGC GCAACCGGCG
CCGCGAACGG GCACATTGCC GGCCCGGCTT TCTCCGGGGC TGGAGGGCGT GATCGAGACC
GGTTATCCGA CCGCGGAGGG ACCGCGGCAG GAAGACGGCG GCCGTTGGGT CAGCGGGTAT
GCCCTGATCG GCCCGCATAC GCCGGGGCGG CCGCAGCATC TCATCGCATT CGATCTCACC
GCCCACGAAT GGTATCGGGC GCTTTGGAAC ACGGCGCTCG GGACCGCCGG CTACGTATGG
ATGCTGCTCC TGCTGCCGCT GGCGGCCCTC GTGACCACGC ACCGGCAGTT GATGCAAGGA
GAGGCGCTGC GGAATCTGAC CGAGGCCATG GAGCAAGGGC ATTCGCCGAT CATGATCGTC
GACCTTGGCC TGCGCATCGA ATACGCGAAC GCCAAGTTCT GCCGGCTGCT CGGCTATTCG
CGCCGCGAAC TGCTGGGGCG GGAATGGCGG ACATTTCACG GCGCCGAGGC GCGCCCGGAA
ATCTTTGCGG ACATGGTGAC CACCATCCGG GCCGGGCATC CGTGGACCGG CGAATGGATG
ATGCCACGCA AGGACGGCAC GGTCTTTCCG CTCCGCGCGG CGATCACGCC GGTCAAGAAC
CGCGCCGGTG AGATCCGGAG CTTTGTCGGG GTGTTTGAAG ACATGACCGA GATCCGCCAA
ACCGAAGCGC TGCTGCGCGA AGCGAAGGAG CGGGCCGAGG CGGGCGATCG CGCGAAGGGA
CAATTCCTCG CCACGATGAG CCACGAAGTG CGCACGCCGC TAAACGGCAT CGTGGGTTTC
GCGAGCCTGT TGTTGGAGAC GGAACTGACG CCGGAGCAGC TGGAATACGT CGAGACGATC
CGTACCAGCA GCGAGACCTT GATCCAGTTG ACGGGCGATA TCCTCGATTA CGCGCGCATC
GAGTCCGGCC GGCTAAAGCT CGAGCCACAG CCCTGCGATC CGCGTGAATG CGTGGAGAAC
GCACTCGACC TTGCCGCCAC GCTGGCCCTG CCCAAAGGCG TCGAGCTGCT GCACTGGATC
GACGACACCG TACCGGCCGC CATCGTTGCC GACGTCGGTC GGCTGCGGCA GGTGATCGTC
AATCTGGTGA ACAATGCCGT GAAATTCACC CCCACGGGCG AGGTGGCCGT CGACGTGCGG
GTGGTGGCTT CGTCGCCGGC GCCGGAAACC GCGGACGCGG AAGCGTTGCC ATCAGCCCGG
GAGACCGCCG ACGCGGGCGA GGCGTCGTGC ACGCTCGAGT TTTCCGTGCG CGACACCGGG
ATCGGCATCG CCCCGGCACA CCATCCCAAA ATTTTCCGGC CCTTCAGCCA AGTGGACGAT
TCGACCACGC GCCGCTATGG CGGGACGGGC CTCGGGCTCG CGATCTGCAA AAACCTCGTC
GGACTGATGA ACGGGCACAT CACGTTCACG AGCGAACTGG GCCGCGGCTC GAGGTTCACG
TTCACCATCC GGGTGCCGGT CCACACGCCC GCGGCAGACC GCGTGCCGCC AACGCCACTG
CAAGGCCGGC GCGTGATGCT CGTGGCGTCA GGCGGAATGT GCGAGGAGCT GACGCGGCTG
GTCCGACGCT TTGGCGGTGA GGTAATGGAG AGCGAAACGG CGGCCTCGCC GCAACGATCA
GACTGGGACC TCGGTATCCA GGATCTCAGT GCCAGCGCCG CGACCGAACT CGCGACGTCG
CGCGAACCGT GCGTGAGCTG GCTGCCCGAA AAAATGGTGG CGCTCATCCC TGTGCCGCTG
CCCGGAGAAA TTCGCGCGGC GTTGCGCCCG TATTTCCGAC AGCTCCTGAA CAAGCCGCTG
CATCACGACC TGTTCGGAGG CGTGCTGGGC GCGAGCGCCG CGGATCCTCC CGCCGCGGCC
ATGCCACCGC CGCCACAGTT CGGCCTTCGC GTGCTCATCG TGGAGGACAA CGCGGTGAAC
CAGCGATTGA TTCAAACCGT GGTCAGCCAT CTGGGCTGCA CTTCGCACCT CGCGGTGAAC
GGTCGCGTCG CGTTGGAGGA GATCGCGCGG TCGCGGCCCG AAGTCGTGTT GATGGATTTG
CACATGCCCG AATTGGACGG GCTGGCGACG ACCGCGCAGA TCCGGGCGGG TGCGGCCGGC
GAGGCGGTGC GGGGCGTGTG GATCGTCGCG TTGACCGCGG ACGCGCGGAA CGAACAGCGC
GAGCGCACCC TGGCCGCGGG AGCGAACGAT TATCTCACGA AGCCCGTTCG TCCGGCGGAG
TTGCAGGCCG CACTCGAGCG CTATCTCGCC TCACGACCGA CGGCCGCGTG A
 
Protein sequence
MLSLLQRKAV LAFASAVIFA AGIGAGYWRY LRARAELLAE LTARVQGCAV AFHVAELQEL 
TGAPAERESP VYASVKDRLG RLRTSDERQP RISLLRYLPA NGTLLPLADS APRTDPAQPA
PRTGTLPARL SPGLEGVIET GYPTAEGPRQ EDGGRWVSGY ALIGPHTPGR PQHLIAFDLT
AHEWYRALWN TALGTAGYVW MLLLLPLAAL VTTHRQLMQG EALRNLTEAM EQGHSPIMIV
DLGLRIEYAN AKFCRLLGYS RRELLGREWR TFHGAEARPE IFADMVTTIR AGHPWTGEWM
MPRKDGTVFP LRAAITPVKN RAGEIRSFVG VFEDMTEIRQ TEALLREAKE RAEAGDRAKG
QFLATMSHEV RTPLNGIVGF ASLLLETELT PEQLEYVETI RTSSETLIQL TGDILDYARI
ESGRLKLEPQ PCDPRECVEN ALDLAATLAL PKGVELLHWI DDTVPAAIVA DVGRLRQVIV
NLVNNAVKFT PTGEVAVDVR VVASSPAPET ADAEALPSAR ETADAGEASC TLEFSVRDTG
IGIAPAHHPK IFRPFSQVDD STTRRYGGTG LGLAICKNLV GLMNGHITFT SELGRGSRFT
FTIRVPVHTP AADRVPPTPL QGRRVMLVAS GGMCEELTRL VRRFGGEVME SETAASPQRS
DWDLGIQDLS ASAATELATS REPCVSWLPE KMVALIPVPL PGEIRAALRP YFRQLLNKPL
HHDLFGGVLG ASAADPPAAA MPPPPQFGLR VLIVEDNAVN QRLIQTVVSH LGCTSHLAVN
GRVALEEIAR SRPEVVLMDL HMPELDGLAT TAQIRAGAAG EAVRGVWIVA LTADARNEQR
ERTLAAGAND YLTKPVRPAE LQAALERYLA SRPTAA