| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0874 |
|---|
| Symbol | |
|---|
| ID | 6207309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1077302 |
|---|
| End bp | 1077709 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641690497 |
|---|
| Product | ATP synthase F1, epsilon subunit |
|---|
| Protein accession | YP_001817762 |
|---|
| Protein GI | 182412696 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
|---|
| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTCA CGCTCGAAAT CGTCACCCCT GAAGCCCGGG TCTACTCCGA CACGATCGAT
TCGGTGGTCA TCCCGACCGC CGACGGCGAG GTCGGCATTC TCCCCGGTCA CATTCCACTC
CTGACCCAGG TCGAGGACGG CGAATTGCGG GTGACGAAGA ACGGCCAGAC AGAGTGGCTG
GTGGTCGGCG GCGGTTTTGC TGAAGTCGAA GGCGACCGCG TCCGGGTGCT CGCAGAGCAC
GCTGTCACCG AATCGACGAT CGACGAGAAA GCCGTCGAGG ACGCGTTACG CCGCGCCCAA
GACCAGATGA AGGACGCCGC CAAAATGGAC CCGAACGAGT TCCAGAACCT CCAGAGCATG
GTTCGATTCG CCGGCGTGCA ACTTGCCCTG AAACGCCGCA AACGGTAG
|
|---|
| Protein sequence | MPLTLEIVTP EARVYSDTID SVVIPTADGE VGILPGHIPL LTQVEDGELR VTKNGQTEWL
VVGGGFAEVE GDRVRVLAEH AVTESTIDEK AVEDALRRAQ DQMKDAAKMD PNEFQNLQSM
VRFAGVQLAL KRRKR
|
|---|
| |