| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0760 |
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| Symbol | |
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| ID | 6204731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 928688 |
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| End bp | 931147 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641690384 |
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| Product | permease |
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| Protein accession | YP_001817649 |
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| Protein GI | 182412583 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.21573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.423972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCT CCGTGCCTCG CCTCGCTCGC AAACGGCCGT CGTGGCTGCC TGTGGCCGCA
CTCGCTCAGG ACTTCCGCTT CGTCCTTCGC TCGCTGGCAA AATCCCCCGG CTACACGCTC
GCGGTCGTCC TTACGCTCGC GCTCGGCATC GGCGCCGCCA CGGCGATCTT CAGCGTGGCC
GACCGCGCCT TGTTTCGACC CCTGCCCTAC CCGGCCGCGG ACGAACTGTT CGTCGTGGGC
CGCACCACCC CGCGCCACGC CTTCATCCCC CATCTCCTAC CGGTGCAGCT CGCCAGCTAT
CGCGAAAATG CCAAGTCCTT CCGCTCCCTC GCGGCCTTCG AGCACAGCTG GTCGAACGTC
GTAGTGGGAA ATGCACCCGC CGGAGGGATC ACCGCCGGCA TCTCGGCCGA CTACTTCGAC
ACGCTCGGTA CGTTGCCGCT GCTCGGCCGC CTGTTCTTGC CCGGTGAGGA CCAGCCCGGC
GCCGGGCGCG TCATCGTGCT AAGTCACCGC TTCTGGCGGG ACAAACTCGG TGCCGCTCCG
ACCGCGATCG GGCGGGTTGT GCTGGTGGGC GGCGAATCGT GCGAGGTTGT CGGCGTGTTG
CCACCGGATT TCCGACCGCC GCTTGGTACG GCCGCAGACC TCTATCGCCC ACTCGCGAGC
GCCCCGAATC CCGCGGCGCC GTTTGCCGGA AAGGTGGTTT ACGTTGTGGG TCGGCTGCAG
CCCGGCGCCA CCTCCGCGCA GGCCGCCGCG GAACTGGCCG GCATCCAGGT GCCGGTGAGC
GGCTCGGCGG CCCGACAGCT CGCCGAACAG AAACCCAAAC TGATGCCGCT GACCGAGTGG
ACTCATCAGC AGTCGCCCTT CGCGATGCAC GGAGCGCTGC TCGCGGCCGT CGCATTCCTC
TATGCGATCG CGTGCACCAA CGCCACCAGC CTCATGCTCG CCCGCGTCCA TGGCCGGCGC
CGGGAGCTTA GCGTCCGGCT CGCGATCGGA TGCAGCCGGA GCCAATTGCT TCGCTCGGTT
CTCGCCGAGA ACCTCGCTCT CGTGCTGCTC GGCGGCGCGG GCGGCGGCCT GGCCGCGATC
TGGGGCCTGC CCGCGCTGGA AAGACTCGCT TCCAGCGCCG CAGCTGCCGA CGGCGCAGTT
TGGCAGCTGG ATTGGCGGGC GCTCGCCTTC GCCGCCGCGC TATCGCTCGT CACGAGCGTG
CTCGTTTCCC TGGCGCCCGG CTGGCAGGTG CTGCACGCCA ACGTCTCCGA GGGGCTCAAG
GACACCGCCC AGGCGTTGGG CGAAAGCCGG CGTCTTCGCC GCGTTCGCGG CGGCCTCGTG
GTCGTCGAGG CGGCGCTGGC GATGGCGCTC CTGATCGGCG CCGGTTTGAT GGTCCGCAGC
GTCGTCCACC TCCAGCACAT CGACCGAGGT CTCGACCTCA CCAACAAGGT CTCGGTGTGG
CTCAAGCTGC CGGACGGAAG CTACCGTTCC GCCGAGGCTC AACTCGAACT CACGCGGCGA
CTCGAGGAAC AGTTGCGCAC GATCCGGGGC GTGCAGACCG TCGCGGTGAC CACCGGCGTC
CCTCCCTTCA GCGGCGCGAT ATCGTGGCCG CTGGCCAAGC CGGATGGCTC GGCCTACCAG
GCGAACGTGA ATCCCGTCTC GCCAGGATTT CTACGCACGC TGGGCCTGGT GCTCGTTCGG
GGCGAGTGGT TCGACGATGC TCGGCCGAGC GGAGAACGCG TGGTCGTGAT CAACGAGGCG
ATGGCGCGCG GGTTCTTCGG TGCCGAGGAT CCGCTCGGAC GTTCGCTCGT CGTCATGCCA
GGCCAACAAA AGCAAGCGCC GTGGCGGGTG GTCGGCGTGG TGGCCGACGT GCGGGGCCGC
GTCCACGCTT CTCCCTCTCC GCAGCTCTAC TATCCCTACT GGCAGATGCC GTCCACGTTT
GCCGTTACCG TAGTCTTCGG GCTCGGCGGG CCGCGCGATA CGGCCTTTGA CGACGCCGTC
CGGCGGGCGG TGTTCGTCGT CGATCCCCTG ATCGCGACGT TGATGATCAC GTCGCTCGAC
GAAGCGGCCA ACAGCCAGCT GGCCCAGGAA CGCTACGTCC TGCGGGTCAT GCAGGTCTTG
TCCGCCCTCG CGCTGGCGCT CGCCACGGCC GGGCTGTTCG CGGTGATGGC GTATGCCGTC
GCGCAGCGGA TGGGAGAGTT CGGTGTCCGG CTGGCACTCG GGGCGTTGCC ATCGGACCTC
TCGCGGCTGG TGCTGCGACG CGGGCTGGTG CTCGCCTCGA TCGGGGTGCT CATCGGCTGC
TCCACCGCGT GGGCCCTGAC GCGTTTTCTC CAGAGCCTCC TTTACGAAAC CAGTCCGCTC
GATCCGCTCG TCTACGCTGC CGTCGCGCTG CTCCTGCTCG CCGCCGCCGC GCTCGGCTGC
TGGCTCCCCG CTCGGCGTGC GGCCCGTGCG GATGTCGCGC GCCTGCTGCG CGCGGAATGA
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| Protein sequence | MSTSVPRLAR KRPSWLPVAA LAQDFRFVLR SLAKSPGYTL AVVLTLALGI GAATAIFSVA
DRALFRPLPY PAADELFVVG RTTPRHAFIP HLLPVQLASY RENAKSFRSL AAFEHSWSNV
VVGNAPAGGI TAGISADYFD TLGTLPLLGR LFLPGEDQPG AGRVIVLSHR FWRDKLGAAP
TAIGRVVLVG GESCEVVGVL PPDFRPPLGT AADLYRPLAS APNPAAPFAG KVVYVVGRLQ
PGATSAQAAA ELAGIQVPVS GSAARQLAEQ KPKLMPLTEW THQQSPFAMH GALLAAVAFL
YAIACTNATS LMLARVHGRR RELSVRLAIG CSRSQLLRSV LAENLALVLL GGAGGGLAAI
WGLPALERLA SSAAAADGAV WQLDWRALAF AAALSLVTSV LVSLAPGWQV LHANVSEGLK
DTAQALGESR RLRRVRGGLV VVEAALAMAL LIGAGLMVRS VVHLQHIDRG LDLTNKVSVW
LKLPDGSYRS AEAQLELTRR LEEQLRTIRG VQTVAVTTGV PPFSGAISWP LAKPDGSAYQ
ANVNPVSPGF LRTLGLVLVR GEWFDDARPS GERVVVINEA MARGFFGAED PLGRSLVVMP
GQQKQAPWRV VGVVADVRGR VHASPSPQLY YPYWQMPSTF AVTVVFGLGG PRDTAFDDAV
RRAVFVVDPL IATLMITSLD EAANSQLAQE RYVLRVMQVL SALALALATA GLFAVMAYAV
AQRMGEFGVR LALGALPSDL SRLVLRRGLV LASIGVLIGC STAWALTRFL QSLLYETSPL
DPLVYAAVAL LLLAAAALGC WLPARRAARA DVARLLRAE
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