Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0712 |
Symbol | |
ID | 6205584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 877087 |
End bp | 878991 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690336 |
Product | RDD domain-containing protein |
Protein accession | YP_001817601 |
Protein GI | 182412535 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.226192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC CAGCCCGCAC TTTTTTCCTG GCCGCGCTCG CGTCGTGGAT GGCGCTGACT GCTGCGGCTC TGGCGCAGAA CGATCCCGCG CCAGCGGCTC CGGATCAGTC CACCCCTGCG GCTCAACCCA GCGCCACGAC GGCCGACCCG CAGACCGCGC CCGCCGCCGA GGAACCAAAA GCGGCACCGG TGGCGGAACA GCCGGCCGCT CCTGAGGCGG CGCCCGCCAG CGCGGCGGAG CCGGAGATGC GGCGGCTTGA TCAACCTGCG GCCGAGGAGA CCGAAACCAG CGCTGCCACG AACGACGAGG CGACAAGCAC CGACGAGCAG AAGGTGGAGA CACAGGCGCC CGACGCTCCC GAGGCGCCTC CCGCTCCCGC ACCCAAGGCC GAACGCAAGT GGGAGCGGCA GCAGTTCAAC CGCCACGCGG GCAATGAGCG GGTTTCGATC TGGCAGGATT CCACCCTTGC GGAGGGCGAG GAGGCCGGCG CGGTCGTGTC CATCGTCGGA TCTTCCACCT CCGCCGGCAA GGTTAGCGAT GCCGTCGTCT CCATCCTTGG CTCGTCGACG TCCTCCGGCC ACGTAGGTGG GGCGGTCGTA TCCGTTTTTG GCAGCTCGCG CATGACGGAC GGCAGCGTCG GCGACGCCGT CGTCTCCGTG CTCGGCAACA CCTATGTCAA CGGCCGGGTC CGCGGCGACG TCGTCGCCGT GCTGGGCAAC GTGGAACTCG GGCCGCAGGC CGAGGTTCAC GGCCAGATCG TTTGTGTTGG CGGCAAGGTC AACCGCGACG CGGCCGCCCA GGTTCACGGT CAGGTCAACA ACATTGCCAT GGGATTCAGC TTCGGCGGAT TCGAATGGCT GCACGCCTGG ATTTCCCAGT GCCTGCTCTA TGGACGGCCC CTCGCCTTCG GGCCGCATCT GATGTGGGCG TGGTGGATCG CGATCGGGTT CTTCGTCCTC TACCTGGCGT TCGCGTTGTT GTTCCCGCGC GGGATTGTGC GCTGCGCGGA GACGTTGGAG CAGCGCCCCG GTTTCTCGAT TCTCACCGCG TTCCTGGTCA CGCTGCTGGC GCCCGCGGCG GTGGTGATCC TCGCGATCAC GGTGATCGGC ACCCCCGCCG TGATCCTCGG GCTCTTCGTG GCCGGACTGT TTGGGAAGGC TGCGATGTTC GCGTGGGTCG GCCGGCGCAT CACCCGTTTC CTGGGAAATG GTCCGCTGGC GCATCCGTTC TTCGCCGTCC TGATCGGTGG CGTGATCGTG CTGTTGCTCT ACACCGTGCC CGTCGTCGGC TTCGTCGTCG CGAAGCTCAC CTCGTGGCTC GGCGTCGGCA TTGTAATCTA TACCCTGATT CTCGTCATGC AGCGGAACAA GGCCGCCCGC CTGCCCGCGG TGGCGGCGGC GGCACCGGCG ACCACAATCC TCCCGGCAGT CGCTCCGCTC GGAGCTACGG GCGCCAGCGC CTCCATGTCG ACCGCCGACG CTGGCGTGGC CAGTGCGCCC GTTTCGGTGG TCGTGTCGGC GGCGACGCTC ACGCGAGCCG GTTTCTGGAT ACGCGCTGCG GCGTCGCTGA TCGACGCGGC GATCGTCGCG GTGGCGGTGA ATCTGTTCCC GGATCGCTGG GAGCCGAACT TCCTGCTGTC GTTCGCGACT TATTGCGTGG TCCTGTGGGC AACCAAGGCG ACGACGATCG GCGGCATCGT CTGCAGCCTC AAGGTGGTGC GGCTCGATGA TCGCAAGCTC GACTGGCCGA CCGCGCTGGT GCGCGTGCTT GGCGGCTTCA TCTCGCTGAT TCCGGCGGGC CTCGGGTTCA TCTGGGTCGC CTTCGACGAC CAGCGGCAGT CCTGGCATGA CAAGATCGCC GGCACCACCG TGGTGTATGT GCCGCGCGGC CTGTCGCTGC TGTAG
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Protein sequence | MKTPARTFFL AALASWMALT AAALAQNDPA PAAPDQSTPA AQPSATTADP QTAPAAEEPK AAPVAEQPAA PEAAPASAAE PEMRRLDQPA AEETETSAAT NDEATSTDEQ KVETQAPDAP EAPPAPAPKA ERKWERQQFN RHAGNERVSI WQDSTLAEGE EAGAVVSIVG SSTSAGKVSD AVVSILGSST SSGHVGGAVV SVFGSSRMTD GSVGDAVVSV LGNTYVNGRV RGDVVAVLGN VELGPQAEVH GQIVCVGGKV NRDAAAQVHG QVNNIAMGFS FGGFEWLHAW ISQCLLYGRP LAFGPHLMWA WWIAIGFFVL YLAFALLFPR GIVRCAETLE QRPGFSILTA FLVTLLAPAA VVILAITVIG TPAVILGLFV AGLFGKAAMF AWVGRRITRF LGNGPLAHPF FAVLIGGVIV LLLYTVPVVG FVVAKLTSWL GVGIVIYTLI LVMQRNKAAR LPAVAAAAPA TTILPAVAPL GATGASASMS TADAGVASAP VSVVVSAATL TRAGFWIRAA ASLIDAAIVA VAVNLFPDRW EPNFLLSFAT YCVVLWATKA TTIGGIVCSL KVVRLDDRKL DWPTALVRVL GGFISLIPAG LGFIWVAFDD QRQSWHDKIA GTTVVYVPRG LSLL
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