| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0704 |
|---|
| Symbol | |
|---|
| ID | 6207441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 866566 |
|---|
| End bp | 867396 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641690328 |
|---|
| Product | LytTR family two component transcriptional regulator |
|---|
| Protein accession | YP_001817593 |
|---|
| Protein GI | 182412527 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.674394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACCA TCCGCGTGCT GATTGTCGAC GATGAGCCAC TGGCTCGCGA AGGTTTGGCT
TTGATGGCGG GCGCCGATCC AGCCGTGGCG GTGATTGGAC AGTGCGCGGA CGGTCTGACG
GCGGTTACGC AGATTCGAGA GCTGCGGCCG GATCTGCTCT TCCTCGATGT GCAGATGCCC
GGACTCGACG GTTTTGAAGT GTTGGCGGCG TTGCCCCCCG CCGAGCGGCC GGCGGTCATT
TTTGTGACGG CATTCGAACA GCATGCGATC CAAGCCTTCG AGGTCTGTGC GGTCGATTAC
CTGCTCAAGC CGTGCAGCGA TGCCCGCTTC GCGAGCGCAC TGCTCCGGGC CAAGGAAGGG
ATACGGCAAC GACATCTTGG CCAGCTGAGC GCCCGGCTCG AGCAGTTGCT CGAGTACGTG
CGGAATCTTG AATCAGGCGC GTCGCCCCAG GCGGCGCGGG TGGCCGAGAT CCAGCCCACG
GCGCCGGAGC CGGCCAACCG CATTGTGGTG AAAGCGGACG GCGCTCTCCA CTTCATCAAG
AAGCAGGATG TGCTCTGGAT CGAAGCCCAA GGCGACTTTG TGAAGGTCCA GACGGCGACC
AAGACACAGC TGGTACGCGA GACCCTCCAA TCATTCGAAC GTAAACTCGA CCCCGCCAAG
TTCCTGCGGA TTCACCGATC GTTCGTGGTC AATCTGGACC ACGTGCGGCG GGTGGAGACG
GCGCTTTATG GGGACTATTC GGTGTTCATG GCCGACGGTA CGAAACTGCG ATTGAGCCGG
AACTATCGCG GGAAACTAAA GACACTCCTT CGTCCTGCGG GATCGAAGTA A
|
|---|
| Protein sequence | MKTIRVLIVD DEPLAREGLA LMAGADPAVA VIGQCADGLT AVTQIRELRP DLLFLDVQMP
GLDGFEVLAA LPPAERPAVI FVTAFEQHAI QAFEVCAVDY LLKPCSDARF ASALLRAKEG
IRQRHLGQLS ARLEQLLEYV RNLESGASPQ AARVAEIQPT APEPANRIVV KADGALHFIK
KQDVLWIEAQ GDFVKVQTAT KTQLVRETLQ SFERKLDPAK FLRIHRSFVV NLDHVRRVET
ALYGDYSVFM ADGTKLRLSR NYRGKLKTLL RPAGSK
|
|---|
| |